Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01101 ATGGGTCGCTCTCGTGGGAATTTTCACCACGCCGACGAGGACCCCAACCAGAGGTCAAGGAGAAAAAAGAATGCTGCCAGTGGAGAGAATTCAGAATCTGGAGCTGCAGGCCAAGGAGCAGGTGAAGGGAAAAAGGCTCTGTACCACTGCAATTATTGTAATAAAGATATAACAGGAAAAATCCGTATTAAGTGTGCCATGTGCCCAGATTTTGACTTGTGTATAGAGTGCTTTTCTGTTGGAGCTGAGGTGACACCTCATAAAAGCAGCCACCCTTACAGGGTTATGGATAATTTGTCTTTCCCTCTTATTTGCCCAGACTGGAATGCAGATGATGAAATCTTGCTTCTAGAGGGAATTGAAATGTATGGCTTGGGAAACTGGACAGAAGTTGCTGAGCATGTTGGAACCAAAAACAAAGAGTCATGCATAGAACACTATAGGAATGTATACCTGAACTCCCCGTTCTTTCCTGTTCCGGACATGTCTCATGTTGTTGGGAAAAACAGAAAAGAACTTCTTGCCATGGCCAAAGGGCAGGGTGAAGACAAGAAAGGAATTTCCATGGGGGATCTTAGTATAAAGGCAGAATCTTCCTTTTCTCCATCTAGAGCCAAGGTTGAAGATTCGCATAAAGCTGGCTCCTCTAATCGCTTGGCATCCGGTTTGAATTCAGAGTCCGATGGCCCCTTGGGTAACACACATGCTGCAAACCAAAAGGCATCTAATGTGGGCCGTGGAAAAGGTGGTCCTGGAATCATTAAAATGGAAGATTCTCAACTAGACAGAGATTTTGGAGGAAAAAAGCCTACTTCCTCTGGAAATGAAGGTCCTTCTTTAGTAGAATCGAGTGGTTATAACGCCAAAAGGCAGGAATTTGATCCTGAATATGATAATGACGCTGAACAACTACTCGCTGAAATGGAATTTAAGGACACTGACACTGATGATGAGCGAGAGCTGAAACTACGGGTGTTGCGTTTCTATGCAAAAAGGCTTGATGAAAGAAAGCGTAGGAAGGATTTCATACTTGAAAGAAATTTGTTATACCCAAATCCATTTGAGAAGGATTTAACACCTGAGGAGAAGACAATATGTCGGAAGTATGACTTATTCATGCGCTTTCATACTAAGGAGGAGCATGAGGAGTTGCTTAGAACCGTTATCTCTGAACATAGAACCCGTAAAAGACTTCAAGAGCTTAAGGAAGCCCGGGCTGCTGGTTGCCGCAATTCAGCTGAAGCTGATAGATATCTGGCGCAAAAGAGAAGAAGGGAAGCTGAAGAAAGTGGTTGTAGGACAAAAGAAAGTGCTCAGGGCGGCCCAAGCAATCAAGGGGTTCCTAATGCATTGATGTCTCCAGACTCTGCTGGCAAGGATTTGAGTGGAAGACCTGCAGGGCCTGCTACTTCTAGTTCTGTCAATGAAATGGATGTGACGGGATACTATGGGGCAGATTTACTTTCTGAACCGGAGAAACGTTTATGCTGTGAGCTAAGGTTGCCTCCAGCCATGTATCTAAAGATGCAAGAACAACTGTCTCTGCAAATACTTGCCGGCACTGTCGCTGCAAAATCTGATGCTCATCAATTGTTCAAGATGGATGCCATGAAAATTGACAGGGTGTATGATATGCTCATTAAAAAGGGGATTGGTTCCCCCTGA 1665 0.4432 MGRSRGNFHHADEDPNQRSRRKKNAASGENSESGAAGQGAGEGKKALYHCNYCNKDITGKIRIKCAMCPDFDLCIECFSVGAEVTPHKSSHPYRVMDNLSFPLICPDWNADDEILLLEGIEMYGLGNWTEVAEHVGTKNKESCIEHYRNVYLNSPFFPVPDMSHVVGKNRKELLAMAKGQGEDKKGISMGDLSIKAESSFSPSRAKVEDSHKAGSSNRLASGLNSESDGPLGNTHAANQKASNVGRGKGGPGIIKMEDSQLDRDFGGKKPTSSGNEGPSLVESSGYNAKRQEFDPEYDNDAEQLLAEMEFKDTDTDDERELKLRVLRFYAKRLDERKRRKDFILERNLLYPNPFEKDLTPEEKTICRKYDLFMRFHTKEEHEELLRTVISEHRTRKRLQELKEARAAGCRNSAEADRYLAQKRRREAEESGCRTKESAQGGPSNQGVPNALMSPDSAGKDLSGRPAGPATSSSVNEMDVTGYYGADLLSEPEKRLCCELRLPPAMYLKMQEQLSLQILAGTVAAKSDAHQLFKMDAMKIDRVYDMLIKKGIGSP 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01101 554 PIRSF Txn_adaptor_ADA2 35 554 IPR016827 GO:0003713|GO:0006357|GO:0035065
Gma15g01101 554 ProSiteProfiles Myb-like domain profile. 108 151 IPR001005 -
Gma15g01101 554 MobiDBLite consensus disorder prediction 436 451 - -
Gma15g01101 554 MobiDBLite consensus disorder prediction 1 42 - -
Gma15g01101 554 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 1 553 IPR034318 GO:0003713|GO:0006357|GO:0035065
Gma15g01101 554 ProSiteProfiles Zinc finger ZZ-type profile. 45 101 IPR000433 GO:0008270
Gma15g01101 554 SUPERFAMILY Homeodomain-like 101 154 IPR009057 -
Gma15g01101 554 SUPERFAMILY Homeodomain-like 462 551 IPR009057 -
Gma15g01101 554 SMART zz_5 44 89 IPR000433 GO:0008270
Gma15g01101 554 Pfam Myb-like DNA-binding domain 107 150 IPR001005 -
Gma15g01101 554 Gene3D - 41 96 IPR043145 -
Gma15g01101 554 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 155 IPR017930 -
Gma15g01101 554 Gene3D - 102 153 - -
Gma15g01101 554 MobiDBLite consensus disorder prediction 1 27 - -
Gma15g01101 554 MobiDBLite consensus disorder prediction 214 241 - -
Gma15g01101 554 MobiDBLite consensus disorder prediction 198 284 - -
Gma15g01101 554 ProSitePatterns Zinc finger ZZ-type signature. 50 77 IPR000433 GO:0008270
Gma15g01101 554 MobiDBLite consensus disorder prediction 421 475 - -
Gma15g01101 554 Pfam Zinc finger, ZZ type 46 88 IPR000433 GO:0008270
Gma15g01101 554 ProSiteProfiles SANT domain profile. 103 155 IPR017884 -
Gma15g01101 554 ProSiteProfiles SWIRM domain profile. 468 554 IPR007526 GO:0005515
Gma15g01101 554 SUPERFAMILY RING/U-box 48 110 - -
Gma15g01101 554 CDD ZZ_ADA2 48 96 IPR041983 -
Gma15g01101 554 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 1 553 - -
Gma15g01101 554 SMART sant 104 153 IPR001005 -
Gma15g01101 554 CDD SANT 108 150 IPR001005 -
Gma15g01101 554 Gene3D - 469 552 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01101 Gma-Chr15 9286500 9293239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01101 1 552 EF-hand Containing Proteins AT3G07740 48.687 2.44e-166 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma15g01101 Myb_DNA-binding 2.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01101 K11314 - gmx:100811887 1101.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01101 15 9286500 9293239 Gma09g00119 09 968141 974508 GST