Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01060 ATGAGTCAACTCGGTGTGGCGTTGCAGGAATCGCTGCGGACTCAGAGGGAGGCCAGGAGTACCATTCTTGGGTTGTTGAGGGAGCAAATGGACGGTGTAGATGGTGGGACCCGCAGGAGGCGAAGCTTGAAGGAGCGGTTCGGATTCATCGGCATGGGATGTTGTGGGGCCTCCTGGGGATTCCGTTCTGACGCGTTAAGTGTCAACCAGGGAGAGCAAGAACAACAACAGGAAACGGATCCCGGTCGAGTAGCGGCGCCAGAATGTGTGGGCCCCGCGGGTTCGGGTTCGGGTATGAATCTTGCGGCGGCGCTGGCGGCGGAGAGGCAGCTCAGGGTGCCTCAGGAGGAGGGCGGTGGGGTGAGGGCGCCGTGGAGGGTGTCGCTGATGAGGCTGCTGGAGGAGACGGAGGGAGGGGACGCTGCCACGGCGGAGAAGGAGAAAGAGAAAGAGGAGAATGTTTTGGGGAATGATTCGGTGTGCTGCGTGTGCATGGGGAGGAAGAAAGGTGCGGCGTTGATCCCATGTGGACACACTTTTTGCAGGGTGTGTTCCAGGGAACTGTGGCTTAATCGAGGCTCTTGTCCCCTTTGCAATCGCTCCATCCTCGAGATTCTCGACATTTTCTAG 630 0.5921 MSQLGVALQESLRTQREARSTILGLLREQMDGVDGGTRRRRSLKERFGFIGMGCCGASWGFRSDALSVNQGEQEQQQETDPGRVAAPECVGPAGSGSGMNLAAALAAERQLRVPQEEGGGVRAPWRVSLMRLLEETEGGDAATAEKEKEKEENVLGNDSVCCVCMGRKKGAALIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILDIF 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01060 209 SUPERFAMILY RING/U-box 151 206 - -
Gma15g01060 209 Pfam Zinc finger, C3HC4 type (RING finger) 158 203 - -
Gma15g01060 209 PANTHER OS01G0917900 PROTEIN 20 209 - -
Gma15g01060 209 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 20 209 - -
Gma15g01060 209 CDD RING-HC 161 198 - -
Gma15g01060 209 ProSiteProfiles Zinc finger RING-type profile. 161 199 IPR001841 -
Gma15g01060 209 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 138 209 IPR013083 -
Gma15g01060 209 SMART ring_2 161 198 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01060 Gma-Chr15 8943702 8944646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01060 1 209 C3H Transcription Factor Family AT4G22250 50.935 3.64e-62 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01060 - - gmx:100804959 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01060 15 8943702 8944646 Gma09g00081 09 644312 645652 GST
Gma17g00088 17 799449 800399 Gma15g01060 15 8943702 8944646 PCT