Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01047 ATGGTGTGGGAACAGAAGCTGTACGAGATTGTCAGAATAAGAGGGAGAAAACTTCTTCAGTCGGCTCTGGACAATGTTGCTGTGAGCCAAATGGCGGTGGTGAACCCAGGTGGTTCTGGAAACTACACAACTTTCGATGATGCAGTGGCTGCGGCTCTAAATAACACCGATACCTGGGGTGTAAATGGATATTTCTTGATTCACGTGGTGATTGGAGTGTATGAAGAGTATGTTTCTATTCCCCAAAACAAGCAGTACCTGATGATGATAGGAGATGGAATTAACCAAACCATAATCAGCTTGATGGTTGAAAGTTGA 318 0.4403 MVWEQKLYEIVRIRGRKLLQSALDNVAVSQMAVVNPGGSGNYTTFDDAVAAALNNTDTWGVNGYFLIHVVIGVYEEYVSIPQNKQYLMMIGDGINQTIISLMVES 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01047 105 Pfam Pectinesterase 32 100 IPR000070 GO:0030599|GO:0042545
Gma15g01047 105 PANTHER PECTINESTERASE 6 99 - -
Gma15g01047 105 PANTHER PECTINESTERASE 6 99 - -
Gma15g01047 105 SUPERFAMILY Pectin lyase-like 27 100 IPR011050 -
Gma15g01047 105 Gene3D - 25 103 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01047 Gma-Chr15 8801221 8801538 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01047 16 100 Carbohydrate Esterase AT2G47550 61.176 8.61e-26 97.8