Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01045 ATGGGGGAAGAAGATATTTTGGTTTGTTCAAAGAGGACTACTGAACTTCCATTTAGGAAAGGACTAGAGGCAAATAAGTGTCTTACTGCATTGAAGAAGAAAAGAATACTTGAAGACGCTATCTTAATTAACAATTTGGAAGATGATAAAGTTTATGTTCCCTCGAAGACATACTCCAGAAGCAAAGCTAGAAAAATGGATGATGTAAAGGATACGGCTTCCAGAAGATGTCATCAGTGCATGAAAAAGGAAAGAGCAGCATATGTACCTTGTACTAAATGTCGGAAAATGTATTGTATGTGGTGCATCAGGAAATGGTATTCCAATTTGTCAATAGAAGATATTGCACAAGAGTGTCCCTTTTGCCAAAAGAATTGCAATTGCAATGTTTGCTTGAGTTCAAGAGGAATGATTAAGACGTCAAACAAGTGCATCAGAGATGATGAAAAGGTTCAGTATCTTCAATACACTATTAACCTGCTCCTTCCGTTTATACAACGAGTTTGTGAAGAACAAAGTCAAGAGCTAGAGATTGAAGCTAAAATACAAGGAAAATCAAGATCTGAAATTGAGATATCACAAATTCCTTGTGAAAATGAACGTATCTATTGTGACCATTGTGCTACTTCATTTACTGACCTTTATCGAAGCTGCCCCAAGTGTTCCATTGAAATCTGCCTTAACTGTTGCAAAGAAATACGCAATGGAAGTATATCACCCCGGTCTGAACTGAAGTTTCAATATGTGAATAGAGGCTATGATTATATGCATGGTGGTGATCCTTTACCAGTGTCTTGTGATTTAAGGACTTCAAAAGGTCATAGAGAGATATTTACCAAATGGAGTGCTAACAGTGATGGAAGTATTAGATGTGCTCCAAAAGAAATGGGGGGCTGTGGTGGCTCTGTGTTGGAGCTGAAGCGCTTGTTTCCAAATGGATGGATATCAGACTTAGAAGCCAAAGCTCGTAACATGCTAAAAACTTATTGCAAAACTGAACAAGCAACTCTTCAGAAAGAAGCAACATCAAGTTGCAATTCTATGATAAGAGCAGCTTTTAGAGATGGCACAAATGATAATAACTTATACTGTCCATTGTCAAGTGACCTCATAAATGAAGGACTGTTTCTCTTCCAAAAACATTGGACTAAAGGTGAACCAATTATAGTTCGTGATGTTCTTAACCAGGGGACAGGTCTGAGTTGGGAGCCAATGGTCACATGGCGAGCACTATGTGAAAATGTGGTTCCAGGGATCAGCTCAAATATGTTAGAAGTGACGGCCATTGATTGCTTGGCTAGTTGCGAGGTAGAAATCAACACTCGTACGTTCTTTAAGGGTTACACACAAGGAAGAACATATAGAAATCTCtggccagagatgctgaagctaaaagattggcccccctctcataagtttgaagatcttttgcctcgccattatgatgaatttatccgttgcttgccatttcaagagtatagtgaccctcgagctggaatcctcaaccttgctgtaaagttgccaccccatgtcctaaagccagacttgggtccaaaaacatatattgcatatggcattaaagaagagcttggcaggggagattcagtaacaaaacttcactgtgatatgtctgatgctGTGAATATTTTGACTCACACGGCTGAGGTAACGTTAACTGATGAACAGAACTGTGTTATTTCAAAACTGAAAAAAGCACACATTGCCCAAGATGAGAAAGAGCACTGTGCCCGAGAAAGGGTTGATGAATGCCTGAATGAAGGACCCTGGAAAGACCACAGAGAACAGGAGGATAACAAGTGTCCCGTTGACATCAATGGAAAAATCTTTCCAAATGATATGCCCACAATCTCCAGAGAAACAACAGAAAcaggtggtgctctttgggatatctttcggagagaggatactgatatgttagaagcatatctaaggaaacactctaaagaatttaggcatacttattgttctccagttgaacagGTTGTCCATCCAATTCATGACCAAAGTTTTTACTTGACTTTGGAACACAAGAAGAAGTTGAAGGAGGAGTTTGGTGTAGAACCTTGGACTTTTGAGCAGAAACTTGGGGAGGCAGTATTTATTCCTGCTGGATGTCCACACCAAGTCAGGAATCTTAAGTCATGCACAAAAGTAGCTGCAGACTTCGTGTCCCCAGAAAATGTTCATATGTGCCTGCATTTAACTGAAGAATTCCGTCGTCTTCCCAAGAATCACAAGGCTAGAGAAGACAAACTCGAGATAAAGAAGATGATCGTCTATGCTGTTGACCACGCTGTCAAAGAATTAGAAGCTTTAGTTAGATGTTCTTGA 2352 0.3312 MGEEDILVCSKRTTELPFRKGLEANKCLTALKKKRILEDAILINNLEDDKVYVPSKTYSRSKARKMDDVKDTASRRCHQCMKKERAAYVPCTKCRKMYCMWCIRKWYSNLSIEDIAQECPFCQKNCNCNVCLSSRGMIKTSNKCIRDDEKVQYLQYTINLLLPFIQRVCEEQSQELEIEAKIQGKSRSEIEISQIPCENERIYCDHCATSFTDLYRSCPKCSIEICLNCCKEIRNGSISPRSELKFQYVNRGYDYMHGGDPLPVSCDLRTSKGHREIFTKWSANSDGSIRCAPKEMGGCGGSVLELKRLFPNGWISDLEAKARNMLKTYCKTEQATLQKEATSSCNSMIRAAFRDGTNDNNLYCPLSSDLINEGLFLFQKHWTKGEPIIVRDVLNQGTGLSWEPMVTWRALCENVVPGISSNMLEVTAIDCLASCEVEINTRTFFKGYTQGRTYRNLWPEMLKLKDWPPSHKFEDLLPRHYDEFIRCLPFQEYSDPRAGILNLAVKLPPHVLKPDLGPKTYIAYGIKEELGRGDSVTKLHCDMSDAVNILTHTAEVTLTDEQNCVISKLKKAHIAQDEKEHCARERVDECLNEGPWKDHREQEDNKCPVDINGKIFPNDMPTISRETTETGGALWDIFRREDTDMLEAYLRKHSKEFRHTYCSPVEQVVHPIHDQSFYLTLEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAADFVSPENVHMCLHLTEEFRRLPKNHKAREDKLEIKKMIVYAVDHAVKELEALVRCS 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01045 783 ProSiteProfiles Zinc finger RING-type profile. 77 123 IPR001841 -
Gma15g01045 783 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJC) DOMAIN PROTEIN 1 783 - -
Gma15g01045 783 SMART cupin_9 477 746 IPR003347 -
Gma15g01045 783 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 73 142 IPR018866 -
Gma15g01045 783 Pfam JmjC domain, hydroxylase 625 729 IPR003347 -
Gma15g01045 783 Gene3D Cupin 357 755 - -
Gma15g01045 783 ProSiteProfiles JmjC domain profile. 496 746 IPR003347 -
Gma15g01045 783 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 1 783 IPR045109 GO:0032454|GO:0033169
Gma15g01045 783 SUPERFAMILY Clavaminate synthase-like 379 781 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01045 Gma-Chr15 8782396 8786470 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Gma15g01045 JmjC 2.5e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01045 K15601 K21989 gmx:100801772 1581.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01045 15 8782396 8786470 Gma15g01045 15 8782396 8786470 ECH
Gma17g00095 17 871447 877035 Gma15g01045 15 8782396 8786470 PCT