Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01036 ATGGACAAAGGATGGGGACTCACCCTTGATACCTCTTCCTCTCAATCTCTTCCATTATTCCCTTCCAACGATAATAAGATGTTTCCTCTCCTCGGATTCCCCGTCAACCTCAGCCGCGCCTCCAAGGAAGACGATGAAAACCGCAAAGTTGTCGGTGAAGTTGACTTCTTCTCTGATAGAAACAAACCTACACCTCCACCCTCTCACGACCACAACGTTAAACCCAACATCGTCAAGAAGGAAATCGATGAAACACCTCTTCACATTAATACTGGTTTACAACTCCTTACTGCTAACACCGGGAGTGACCAATCTACCGTGGATGACGGGGTTTCATCTGATGCAGAAAATAAGCGAGCCAAAACCACTGAGCTTGCACAGTTGCAGGTGGAGCTTCAACGCATGAACTCTGAGAACAAGAAGCTGAAAGAGATGCTCAGCCATGTGACCGGTAACTACACCGCCTTGCAGATGCATCTTGTCACATTAATGCAACAGAACCAGCAGCGAACAGGAAGCACGGAAAATGAGGTTGTTCAGGGAAAGGTAGAGGATAAAAACGTTGGTGTTGGTGGAGGGAAGGTACCAAGACAGTTCCTTGATATAGGTCCCAGTGGCACAGCAGAAGTAGATGATCAAGTTTCGGATTCTTCTTCTGATGAAAGAACACGATCGAGCACACCTCAGAACCATAACATTGAAGCTGGAGCTAGAGATGGTGCGAGAAATAACAATGGTAAAAGCCAGTTGGGTAGGGAAGAGAGTCCAGACTCAGAATCACAAGGTTGGAGTCCCAATAAGCTTCAGAAAATGAACCCTTCCAACCCTATGGATCAATCCACTGCAGAAGCCACAATGAGAAAAGCTCGTGTATCAGTTCGTGCCCGATCAGAAGCTCCCATGATCAGTGATGGATGCCAATGGAGAAAATATGGACAAAAAATGGCCAAGGGGAATCCATGCCCTCGAGCATACTACAGATGCACTATGGCAGTTGGTTGCCCAGTTCGCAAACAAGTTCAACGTTGTGCTGATGATAGAACCATTTTGGTTACAACATATGAAGGCACGCATAACCATCCACTGCCACCTGCTGCTATGGCCATGGCATCAACCACTACAGCTGCTGCTAGCATGTTGCTTTCTGGATCAATGTCCAGTGCAGATGGAATAATGAACCCAAATTTGCTAGCTAGAGCAATTCTTCCTTGCTCTACAAGCATGGCAACACTCTCAGCTTCAGCACCATTCCCCACTGTGACTTTGGACCTCACACACAACCCTAACCCATTGCAATTTCAAAGGCCTGGTGCCCCATTCCAAGTACCCTTCCTTCAAGCACAGCCTCAGAACTTTGGGTCAGGAGCCGCCCCAATTGCACAAGCACAAGCACTTTATAATCAATCAAAATTCTCTGGTCTTCAGTTGTCTCAGGATGTAGGATCTTCTCAATTAGCACCACAAGCTCCTAGACCACCCTTACAACCAAGCCAACAGCCCTCACTTGCTGACACAGTCAGCGCCGCCGCCTCCGCCATCACCGCCGATCCAAACTTCACCGCCGTGCTCGCCGCCGCCATCTCCTCCATCATAGGCAGTGCTCATAATTCAAACAACAACAACAGCAACAACAACACAAGCCGGACTACCATTAGCAGCTTTTCAGGAAACTGA 1674 0.4791 MDKGWGLTLDTSSSQSLPLFPSNDNKMFPLLGFPVNLSRASKEDDENRKVVGEVDFFSDRNKPTPPPSHDHNVKPNIVKKEIDETPLHINTGLQLLTANTGSDQSTVDDGVSSDAENKRAKTTELAQLQVELQRMNSENKKLKEMLSHVTGNYTALQMHLVTLMQQNQQRTGSTENEVVQGKVEDKNVGVGGGKVPRQFLDIGPSGTAEVDDQVSDSSSDERTRSSTPQNHNIEAGARDGARNNNGKSQLGREESPDSESQGWSPNKLQKMNPSNPMDQSTAEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCADDRTILVTTYEGTHNHPLPPAAMAMASTTTAAASMLLSGSMSSADGIMNPNLLARAILPCSTSMATLSASAPFPTVTLDLTHNPNPLQFQRPGAPFQVPFLQAQPQNFGSGAAPIAQAQALYNQSKFSGLQLSQDVGSSQLAPQAPRPPLQPSQQPSLADTVSAAASAITADPNFTAVLAAAISSIIGSAHNSNNNNSNNNTSRTTISSFSGN 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01036 557 Pfam WRKY DNA -binding domain 304 361 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma15g01036 557 SUPERFAMILY WRKY DNA-binding domain 295 363 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma15g01036 557 MobiDBLite consensus disorder prediction 100 121 - -
Gma15g01036 557 MobiDBLite consensus disorder prediction 166 297 - -
Gma15g01036 557 Coils Coil 118 152 - -
Gma15g01036 557 ProSiteProfiles WRKY domain profile. 297 363 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma15g01036 557 Gene3D WRKY domain 287 364 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma15g01036 557 MobiDBLite consensus disorder prediction 480 501 - -
Gma15g01036 557 SMART WRKY_cls 302 362 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma15g01036 557 PANTHER WRKY TRANSCRIPTION FACTOR 6 28 544 - -
Gma15g01036 557 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 28 544 IPR044810 GO:0003700
Gma15g01036 557 MobiDBLite consensus disorder prediction 242 286 - -
Gma15g01036 557 MobiDBLite consensus disorder prediction 534 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01036 Gma-Chr15 8727729 8730417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01036 1 544 WRKY Transcription Factor Family AT1G62300 52.570 5.11e-161 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma15g01036 WRKY 5.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01036 - - gmx:100802124 997.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01036 15 8727729 8730417 Gma15g01036 15 8727729 8730417 ECH
Gma12g00867 12 8420446 8423957 Gma15g01036 15 8727729 8730417 ECH
Gma06g02731 06 51097118 51100456 Gma15g01036 15 8727729 8730417 ECH
Gma13g02744 13 42051388 42054331 Gma15g01036 15 8727729 8730417 ECH
Gma15g01036 15 8727729 8730417 Gma09g00058 09 451917 454385 GST