Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01025 ATGAAGAAGGGTGAAAAAGCTCAGAGTGAGAGTTCTCTCAAACGCTCCCCACCTTCAACCATGTCTTCCTCCTCCTCTTCTCTTATCACCACTGTTGTTGTTCATAATAATAATAATAATAATCCTTCTCAACCTTCTGAGTTAAGAGCCACGACACGTTGTTGTTTTGGCTCTCATCACCTTCCTGACATAAGCCTCAAAACTCCTATGGCTAGGCCTTATGTTCGATCAAAAATGCCTAGGCTTCGTTGGACACCAGATCTCCATCGTTGCTTCGTGCATGCAGTTCAAAGACTTGGAGGAGAAAACAGGGCCACACCAAAGTTGGTTTTACAGCTCATGAATGTAAAGGGGCTTACTATATCTCATGTCAAAAGCCATCTTCAGATGTACAGGAGCATGAGACACGAGCAGATGAGTCAAGGTGCAAAGAAGAATGATATGGCTCCGGATTTCCTTGCTTCCACACTCTCAACTCTTGGCCAAAGGCAACAGAATCCTCACAAAAGAAGCTGCACGGAAGAGCTTGTTCCCACCCAAGCTCAATGGAATCATGATGAGCAAGAGTGTCACAATGGAAACCAAGGGGGTGAATCGATTATAATTTATAACGGCAATGAACAGAAGGTGCACTCCTACATCATCTTCGAGGGTCTTCTGAGAGGCCAGTCTGTCCAAGAGAATAAAACTACTACTCCTGAGAAGGTGTCACTAGGTGATGCCGGTGATGAAAGGGACCATCAAAGATTCCAAGACACACTGTCCCTTTCAATGAGCTCAAGGCCCTCTTCACATTCGTTCTTGAATCGGAGCCACACTGGTCCAGATGCCAATGATGTCTCTCTTGAGCTCACGCTCTGTTAG 864 0.4549 MKKGEKAQSESSLKRSPPSTMSSSSSSLITTVVVHNNNNNNPSQPSELRATTRCCFGSHHLPDISLKTPMARPYVRSKMPRLRWTPDLHRCFVHAVQRLGGENRATPKLVLQLMNVKGLTISHVKSHLQMYRSMRHEQMSQGAKKNDMAPDFLASTLSTLGQRQQNPHKRSCTEELVPTQAQWNHDEQECHNGNQGGESIIIYNGNEQKVHSYIIFEGLLRGQSVQENKTTTPEKVSLGDAGDERDHQRFQDTLSLSMSSRPSSHSFLNRSHTGPDANDVSLELTLC 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01025 287 Gene3D - 79 137 - -
Gma15g01025 287 MobiDBLite consensus disorder prediction 252 275 - -
Gma15g01025 287 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 32 266 - -
Gma15g01025 287 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 80 133 IPR006447 GO:0003677
Gma15g01025 287 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 32 266 IPR044848 GO:0003700
Gma15g01025 287 MobiDBLite consensus disorder prediction 1 27 - -
Gma15g01025 287 Pfam Myb-like DNA-binding domain 82 132 IPR001005 -
Gma15g01025 287 MobiDBLite consensus disorder prediction 11 27 - -
Gma15g01025 287 MobiDBLite consensus disorder prediction 226 275 - -
Gma15g01025 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 136 IPR017930 -
Gma15g01025 287 SUPERFAMILY Homeodomain-like 78 134 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01025 Gma-Chr15 8651030 8654527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01025 71 135 G2-like Transcription Factor Family AT1G14600 76.923 2.46e-30 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma15g01025 Myb_DNA-binding 8.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01025 - - gmx:100795931 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01025 15 8651030 8654527 Gma09g00046 09 374821 378236 GST