Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g01001 ATGGGTTGCCTTCCATGCTGCAAGTCAAAAGCTGAATCATCCTCTTCAACTGCATCCTCCGGCAAAATTTCCAAAGGAAGGAGAACATTCAAATCTTTGGCTTCAGCTATGTCACATAAAACAGGTATCAGCAGGCAAAGACGAATAGATGCAGAGATAAGAAAATATGGATCTGCAAAAAACGATGTCAAAGTATTCACATATGCACAACTTGCTGAAGCTACAAACAACTACAATCCTGATTGCCTGGTGGGCAAAGGTGGATTCGGGAATGTCTACAAAGGATTCTTAAAAAGTGTTGATCAAACTGTAGCTGTGAAGGTACTGAACAGGGAAGGAGTGCAAGGAACACATGAATTTTTCGCAGAAATTTTGATGTTGAGCATGGTGCAACACCCAAATCTCGTGAAGCTCATTGGTTATTGTGCAGAAGACCATCATAGGATTTTGGTTTATGAATTCATGGCCAATGGGAGTTTGGAAAATCACCTTCTAGACATAGGTGCATATAAGGagcctttggattggaaaaacagaatgaaaatagctgagggagcagctagaggacttgaatatttgcataacagtgcagaaccagctattatataccgtgattttaaatcatctaatatactattagatgaaaattttaatccaaagctctctgattttggacttgctaagattggtccaaaagatggtcaggaccatgtgtcaactagggtgatggggacttttggttattgtgcaccagagtatgctgcttcgggtcagcttagcacaaaatcagatatttatagttttggggttgtgtttttggaaataatcacaggtaggagggtatttgacgcttcaagagctacagaagagcaaaacttgattgagtggGCACAACCTTTGTTTAAGGACAGAACGAAGTTCACTCTAAtggctgaccctttgcttaaagTGCAAAGAGTTGAAGAAAAAGACACAGCTGGTGAATCTGTAAAATGTGCCGGGCATGTTGAATATTTTAAAGCTATAAGTTCAGCTGGATCTGAGAGGGCGTAG 1053 0.2555 MGCLPCCKSKAESSSSTASSGKISKGRRTFKSLASAMSHKTGISRQRRIDAEIRKYGSAKNDVKVFTYAQLAEATNNYNPDCLVGKGGFGNVYKGFLKSVDQTVAVKVLNREGVQGTHEFFAEILMLSMVQHPNLVKLIGYCAEDHHRILVYEFMANGSLENHLLDIGAYKEPLDWKNRMKIAEGAARGLEYLHNSAEPAIIYRDFKSSNILLDENFNPKLSDFGLAKIGPKDGQDHVSTRVMGTFGYCAPEYAASGQLSTKSDIYSFGVVFLEIITGRRVFDASRATEEQNLIEWAQPLFKDRTKFTLMADPLLKVQRVEEKDTAGESVKCAGHVEYFKAISSAGSERA 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g01001 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Gma15g01001 350 CDD STKc_IRAK 84 304 - -
Gma15g01001 350 PANTHER RECEPTOR SERINE/THREONINE KINASE 1 317 - -
Gma15g01001 350 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Gma15g01001 350 Gene3D Phosphorylase Kinase; domain 1 37 154 - -
Gma15g01001 350 PANTHER OS07G0668900 PROTEIN 1 317 - -
Gma15g01001 350 Pfam Protein kinase domain 83 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01001 350 ProSiteProfiles Protein kinase domain profile. 78 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g01001 350 SUPERFAMILY Protein kinase-like (PK-like) 63 305 IPR011009 -
Gma15g01001 350 Gene3D Transferase(Phosphotransferase) domain 1 155 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g01001 Gma-Chr15 8427868 8429958 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g01001 1 316 Glycoside Hydrolase AT3G07070 50.932 8.63e-115 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gma15g01001 Pkinase 7.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g01001 - - gmx:100790828 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g01001 15 8427868 8429958 Gma13g01807 13 33369235 33371815 GST