Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00984 ATGTCTCACATAGCCGTCGAGAGGAACAGGAGAAGACAGATGAATGAACATCTCAAAGTTTTAAGATCTTTGACCCCATGTTTCTATATCAAAAGGGGAGATCAAGCATCTATAATAGGGGGTGTTATAGAATTCATCAAGGAGCTACACCAAGTTCTTCAAGCTTTGGAGTCCCAGAAAAGAAGAAAGAGTTTGAGCCCTAGCCCTGGCCCGAGCCCACGAACACTTCAGCCAATGTTTCATCAACTTGATAGCCCCTCCATGATTGGGACCAATTCTTTCAAGGAACTAGGAGCAAGCTGCAACTCTCCTGTTGCGGATGTTGAAGTGAAAATCTCGGGTTCATATGTGATCTTGAAAGTCATTTGCCACAGAATTCCAGGTCAAGTTGCAAAGATCATAACTGTTTTGGAGAGTCTTTCGTTTGAAGTTCTTCATCTGAATATCAGCAGCATGGAGGAGACTGTCCTTTACCAATTTGTTGTCAAGATAGAGCTGGGATGCCAACTAagtctggaggaactagcaatggaagtgcaacaaagcttctgcttagatgctATAATTGCGCTGTGA 576 0.3924 MSHIAVERNRRRQMNEHLKVLRSLTPCFYIKRGDQASIIGGVIEFIKELHQVLQALESQKRRKSLSPSPGPSPRTLQPMFHQLDSPSMIGTNSFKELGASCNSPVADVEVKISGSYVILKVICHRIPGQVAKIITVLESLSFEVLHLNISSMEETVLYQFVVKIELGCQLSLEELAMEVQQSFCLDAIIAL 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00984 191 SMART finulus 4 55 IPR011598 GO:0046983
Gma15g00984 191 PANTHER TRANSCRIPTION FACTOR MUTE 1 189 - -
Gma15g00984 191 Pfam Helix-loop-helix DNA-binding domain 2 49 IPR011598 GO:0046983
Gma15g00984 191 Coils Coil 191 191 - -
Gma15g00984 191 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 49 IPR011598 GO:0046983
Gma15g00984 191 Gene3D - 1 64 IPR036638 GO:0046983
Gma15g00984 191 CDD bHLH_AtFAMA_like 1 63 - -
Gma15g00984 191 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 69 IPR036638 GO:0046983
Gma15g00984 191 PANTHER TRANSCRIPTION FACTOR FAMA 1 189 IPR044283 GO:0003700|GO:0010052
Gma15g00984 191 SUPERFAMILY ACT-like 114 174 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00984 Gma-Chr15 8269434 8271406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00984 1 189 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 65.366 4.38e-86 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma15g00984 HLH 4.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00984 - - gmx:100785890 373.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00984 15 8269434 8271406 Gma15g00984 15 8269434 8271406 ECH
Gma15g00984 15 8269434 8271406 Gma13g01830 13 33567986 33571756 GST