Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00976 ATGGGGGCCACTGGTGCCGGCAAGACGAAGTTGGCTATAGACGTGGCCAAACACTTCCAACCAGCGGAGATAGTGAACTCAGACAAAATGCAAGTGTACAAGGGCCTAGACATCACCACCAATAAGGTCACTGAAGAAGAGTGTGGCGGGGTCCCACATCATCTGCTTGGCACTGTTGACCCATATATAAATTTCAGCGCCAACGACTTCTGTCGCTACGCCACTTTGGCCATCGACTCCATTGTAGAAAAAAATGGCTTACCCATCATCGCTGGAGGCTCTAATTCTTATTTAGACGCGTTGGTCAATCATTATCCTGAGTTTAGGTTAAGGTACCAGTGCTGTTTCCTCTGGGTCGACGTGGCACTCCCCGTTCTCCATTCCTCCCTCCAGGCACGTGTGGACCGCATGATCGAAGCCGGTCAAGTCAACGAGGTTCGTGACTTCTTCGACCCGAGCGTAACCGATTACACCAAAGGGATACGAAGGGCTATTGGGGTGCCCGAATTCGACGATTTTCTTCGCGCAGAGGCGAATGGGCGGCTAGATGAGAGAACAAAACAGAGGCTTCTTCAGGCTGCCATTGCAAGGTTGAAGATCAACAACTGCACGCTCGCCAACCGCCAGATTCAGAAGATCCACCGCCTGCACGCCTTCTGGAAACGGAACATGCACCGCCTCGACGCCACCGAGGTTTTCCGCGGCTCACGTGACGCCTGGCGCGATCACGTGCTCGCCAAGACCTTGATCATCCTCCACAAGTTTCTCTACGGAGAGAAGAAAACGCCGCACGTTGTCCCCGCCGGAATCGTCTCCGCCAAAGACGTAATTGCGGCGGCGGCGGTGCTTTCTTCGCCGCCGGTAGCAATGGCAGCAACGCGGTAG 885 0.5446 MGATGAGKTKLAIDVAKHFQPAEIVNSDKMQVYKGLDITTNKVTEEECGGVPHHLLGTVDPYINFSANDFCRYATLAIDSIVEKNGLPIIAGGSNSYLDALVNHYPEFRLRYQCCFLWVDVALPVLHSSLQARVDRMIEAGQVNEVRDFFDPSVTDYTKGIRRAIGVPEFDDFLRAEANGRLDERTKQRLLQAAIARLKINNCTLANRQIQKIHRLHAFWKRNMHRLDATEVFRGSRDAWRDHVLAKTLIILHKFLYGEKKTPHVVPAGIVSAKDVIAAAAVLSSPPVAMAATR 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00976 294 Pfam IPP transferase 31 107 - -
Gma15g00976 294 Pfam IPP transferase 110 211 - -
Gma15g00976 294 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 123 224 - -
Gma15g00976 294 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 157 IPR027417 -
Gma15g00976 294 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 261 IPR039657 -
Gma15g00976 294 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 1 261 - -
Gma15g00976 294 Gene3D - 1 256 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00976 Gma-Chr15 8180875 8181837 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00976 111 276 C2H2 Transcription Factor Family AT2G27760 30.729 1.03e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00976 K10760 - gmx:547754 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00976 15 8180875 8181837 Gma15g00976 15 8180875 8181837 ECH
Gma15g00976 15 8180875 8181837 Gma13g01838 13 33678181 33679247 GST
Gma17g00157 17 1326473 1328434 Gma15g00976 15 8180875 8181837 PCT
Gma15g00976 15 8180875 8181837 Gma17g00157 17 1326473 1328434 PCT