Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00966 ATGGTGAGGGTTAGTGTGTTGAATGATGCTCTTAAGAGCATGTACAATGCTGAGAAACGGGGGAAGCGCCAGGTCATGATTAGGCCATCCTCAAAAGTGATTATAAAATTCCTTTTGGTGATGCAAAAGCATGGGTACATTGGAGAGTTTGAGTACGTTGATGATCACAGAGCTGGAAAAATTGTTGTTGAATTGAATGGTAGACTGAACAAATGTGGGGTTATTAGTCCGCGTTTTGATGTTGGTGTCAAAGAGATTGAAGGTTGGACTGCTAGGCTGCTCCCCTCAAGACAGTTTGGGTATATTGTGTTGACTACCTCAGCTGGCATCATGGATCATGAAGAAGCTAGGAGAAAGAATGTTGATCCAACGCAAATCTCGGATCTTGACGTTCTCCTGATGGTGGAACTCAACAGCGGCGTTGACGAAGATCTCGTAAAAGATCCTGAAGATTTAAGAAAAATGTTTACATGGTTGTCTTCTGTTTTTTGTAGATATGATCATTCTTGTTTTACCAAAGCCCAACCGTGGCTTCTCTGTGGATCCATCACCATTGCTTCAACCTCGAGAAACTCGTCGGCGATCAATTTGTACGATGGGAAAGGTCTATTCCGATGGCCAAAGATGGGATAG 633 0.4313 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVDPTQISDLDVLLMVELNSGVDEDLVKDPEDLRKMFTWLSSVFCRYDHSCFTKAQPWLLCGSITIASTSRNSSAINLYDGKGLFRWPKMG 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00966 210 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 124 IPR000630 GO:0003735|GO:0005840|GO:0006412
Gma15g00966 210 PANTHER 40S RIBOSOMAL PROTEIN S15A-1-RELATED 1 124 - -
Gma15g00966 210 Pfam Ribosomal protein S8 7 121 IPR000630 GO:0003735|GO:0005840|GO:0006412
Gma15g00966 210 SUPERFAMILY Ribosomal protein S8 4 121 IPR035987 GO:0003735|GO:0005840|GO:0006412
Gma15g00966 210 Gene3D - 1 69 - -
Gma15g00966 210 ProSitePatterns Ribosomal protein S8 signature. 100 117 IPR000630 GO:0003735|GO:0005840|GO:0006412
Gma15g00966 210 Gene3D - 70 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00966 Gma-Chr15 8094733 8097412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00966 1 121 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 97.521 3.54e-85 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00966 K02957 - cit:102609319 242.276
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00167 17 1410093 1411789 Gma15g00966 15 8094733 8097412 PCT
Gma15g00966 15 8094733 8097412 Gma17g00167 17 1410093 1411789 PCT