Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00965 ATGCGAGTTAGTGATTATCGCCGCAGCAAATTCTCCAAGTCATCTGTAGAGGTGGACTTCTTTACTGAATACGGTGAAGGGAGCAGATACAGAATAGAGGAAGTAATTGGTAAAGGAAGCTATGGTGTTGTCTGCTCTGCATATGATACACACACTGGAGAAAAGGTTGCAATAAAGAAAATTAATGACATATTTGAACATGTTTCTGATGCCACTCGCATTCTTCGCGAGATTAAGCTTCTTAGACTTTTACGCCATCCAGATATTGTGGAGATCAAACATATTCTGTTGCCTCCTTCTAGAAGGGAATTCAAAGATATATATGTTGTCTTCGAACTCATGGAATCTGATTTACATCAGGTCATCAAAGCTAATGATGATCTGACACCAGAACATTACCAGTTTTTCTTGTATCAGCTTCTACGAGGCTTGAAGTATATACACACAGCAAATGTTTTTCACCGTGATCTAAAGCCAAAAAACATTTTAGCAAATGCTGACTGCAAACTGAAGATTTGTGACTTTGGTCTTGCCAGAGTGGCTTTCAATGATACTCCCACTGCTATTTTCTGGACAGATTATGTTGCAACACGGTGGTATAGGGCTCCTGAGTTGTGTGGATCCTTTTTTTCCAAGTATACACCAGCTATAGACATATGGAGCATTGGCTGCATTTTTGCTGAACTTTTGACCGGAAAACCTCTTTTCCCTGGGAAGAATGTTGTTCATCAACTAGACCTTATGACTGATCTTCTTGGAACTCCATCTCTTGAAGCCATTGCTAGGGTACGAAATGAGAAAGCTCGGAGATATTTGAGCAGCATGCGAAAGAAGAAGCCAGTTCCTTTCTCGCAGAAGTTTCCTCATGCAGACCCCCGTGCTCTTCGTTTGTTAGAAAGAATGTTGGCATTTGAGCCTAAGGATCGGCCTACTGCAGAAGAGgctctagcggatccatattttaaaggcttggcaaaggttgagagagaaccatctgctcagccagttaccaagatggagtttgaatttgagagacgccggataacaaaggaagatgtacgagagcttatATACCGAGAGACTTTGGAGTACCATCCGAAGATGTTGAAGGAATTTCTAGAAGGAGCAGAGCCAACAGGTTTCATGTATCCAAGTGCTGTGGATCACTTCAAGAAACAATTTGCATATCTTGAGGAGCATTACGGCAAAGGGGGAACTGTTGCTCCGCCTGAGAGGCAACATGCATCATTACCGAGACCTTGTGTGTTGTATTCAGACCACTCAATGCAGAACACATCTGAGGTTGCAGATGATCTATCCAAATGTTGCATCAAAGAAGTTGAGAAACAACCCATAGAAAGGAGTAGTGCTATCCCTATGTCTAGGCTTCCTTTACAAGCACCGCAAAATATTCAAGGTGTTGCTGCAAGGCCCCGAAAGGTTGTTGGTTCAGTAATGCGTTACAACAACTGTGGGGTAGCAGTGACGGCCGAGGCTGAACAGCGGAGGGTGGTCAGGAATCCATCTGTTTCAGCTCAGTATGCAGCATCGAGCTGTTCATATCCTAGGAGAAACCCAGGCTATAAAAATGAGAGGGGGGCAGAGGATGATGGGATTGAAGGTTCAAATGGACTGCAGCCAAAGTACATGGCAAGAAAAGTGGCTGCTGCTCAAGCTGGACCTGGTGGTCAGTGGTATTGA 1701 0.4039 MRVSDYRRSKFSKSSVEVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDLLGTPSLEAIARVRNEKARRYLSSMRKKKPVPFSQKFPHADPRALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYRETLEYHPKMLKEFLEGAEPTGFMYPSAVDHFKKQFAYLEEHYGKGGTVAPPERQHASLPRPCVLYSDHSMQNTSEVADDLSKCCIKEVEKQPIERSSAIPMSRLPLQAPQNIQGVAARPRKVVGSVMRYNNCGVAVTAEAEQRRVVRNPSVSAQYAASSCSYPRRNPGYKNERGAEDDGIEGSNGLQPKYMARKVAAAQAGPGGQWY 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00965 566 MobiDBLite consensus disorder prediction 521 541 - -
Gma15g00965 566 ProSitePatterns MAP kinase signature. 65 168 IPR003527 GO:0004707|GO:0005524|GO:0006468
Gma15g00965 566 Gene3D Phosphorylase Kinase; domain 1 45 366 - -
Gma15g00965 566 Pfam Protein kinase domain 30 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00965 566 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 14 483 - -
Gma15g00965 566 Gene3D Transferase(Phosphotransferase) domain 1 116 344 - -
Gma15g00965 566 CDD STKc_TDY_MAPK 29 366 - -
Gma15g00965 566 SMART serkin_6 30 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00965 566 ProSiteProfiles Protein kinase domain profile. 30 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00965 566 SUPERFAMILY Protein kinase-like (PK-like) 27 325 IPR011009 -
Gma15g00965 566 ProSitePatterns Protein kinases ATP-binding region signature. 36 60 IPR017441 GO:0005524
Gma15g00965 566 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 14 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00965 Gma-Chr15 8083341 8089422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00965 13 566 MAP Kinase Gene Family AT5G19010 80.423 0.0 926
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gma15g00965 Pkinase 1.3e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00965 - K04371 gmx:100781957 1118.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00965 15 8083341 8089422 Gma15g00965 15 8083341 8089422 ECH
Gma17g00169 17 1421100 1432931 Gma15g00965 15 8083341 8089422 PCT
Gma15g00965 15 8083341 8089422 Gma17g00169 17 1421100 1432931 PCT