Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00950 ATGGGTTGTGTCCATGGCAAGTGCTGTACCCGTTACCCTTCACCCTCAGTGGGTGGCTCCAGAGACTTCAGAGAACTTGGCCCTTACTGTGCCCAAAGGAAGCACATTCTCACTCAGAGTTCACTGCAATTTGTTCCTGTCCCTTCCCATAACTTCACTTTGGAATACTCTGTGCTCACTCAGAGAGGGTACTATCCTGATTCACCTGATAAAGAGAACCAAGATAGTTTTGGCATTAGGACACAGTTTCAAGGCAACCCCAGTGTCCATTTCTTTGGTGTCTATGATGGGCATGGCGAATTTGGTGGCCAGTGTTCAAATTTTGTTAAGGATAGGTTGGTGGAAAATTTGTCAAGTGACATTGCATTGCTGGAGGACCCTGTTAAGGCCTACACTTCTGCATTCCTGACCACAAATGATGACTTGCATAAGAACGAGATTGATGATTCGTTGAGCGGCACCACTGCAATTACGGTGCTGGTTATTGGGAACACCCTTTATGTTGCTAATGTTGGTGATTCTAGAGCCGTGCTGGCTGTTAAGGATGGAAACCGCGTTGTTGCTGAGGACTTGTCCTCTGATCAGACACCATTTAGGAGAGATGAGTATGAGAGAGTGAAGCTTTGTGGGGCGAGGGTGTTAAGTGTTGATCAGGTGGAAGGGCACAAGGATCCAGATATTCAGACATGGGGTGATGAAGAGAATCAGGGTGATGATCCTCCTAGGTTGTGGGTTCAGAATGGAAAGCTTCCTGGAGCTGCTTTTACAAGGAGTGTAGGGGATAAGTTGGCTGAGACTATTGGTGTCATTGCTGTTCCTGAGGTGTCAACGGTTCAGCTTACACCTAACCATCTTTTCTTTGTTGTTGCAAGTGATGGTGTATTTGAGTTCCTATCAAGCCAAACTGTTGTTGATATGGCAGCAAGTTATTCAGATCCCCGCGATGCATGTGCTGCCATTGCTGGAGAGTCTTATAAACTATGGTTAGAACATGAGGGTCGAACAGATGATATAACAATTATCATTGTTCAGATCAAAGGCCTGTCTAATTCAGTTACATCTGGACTTGGAGCAGGTGAGATCAATGTCAGTACTGTAACAAGGACAAAGAGCAAGAGGGTAAAGGGAGCATCCGAAATATCTGCCACTACTGGGTTAGATGTGTGTCGTTCAGTCAGGAATGGTTTCTCTGATTTACAGTCCTGTCCACAGCATGTGGTCTCAACTAGAAGCCCAGCCATAGTGGTCCCCTCTCCGGCATGTCAAACACCAGTTGTATTGTAA 1284 0.4595 MGCVHGKCCTRYPSPSVGGSRDFRELGPYCAQRKHILTQSSLQFVPVPSHNFTLEYSVLTQRGYYPDSPDKENQDSFGIRTQFQGNPSVHFFGVYDGHGEFGGQCSNFVKDRLVENLSSDIALLEDPVKAYTSAFLTTNDDLHKNEIDDSLSGTTAITVLVIGNTLYVANVGDSRAVLAVKDGNRVVAEDLSSDQTPFRRDEYERVKLCGARVLSVDQVEGHKDPDIQTWGDEENQGDDPPRLWVQNGKLPGAAFTRSVGDKLAETIGVIAVPEVSTVQLTPNHLFFVVASDGVFEFLSSQTVVDMAASYSDPRDACAAIAGESYKLWLEHEGRTDDITIIIVQIKGLSNSVTSGLGAGEINVSTVTRTKSKRVKGASEISATTGLDVCRSVRNGFSDLQSCPQHVVSTRSPAIVVPSPACQTPVVL 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00950 427 Pfam Protein phosphatase 2C 78 320 IPR001932 -
Gma15g00950 427 Gene3D - 47 347 IPR036457 -
Gma15g00950 427 SMART PP2C_4 51 343 IPR001932 -
Gma15g00950 427 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 34 420 - -
Gma15g00950 427 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
Gma15g00950 427 ProSiteProfiles PPM-type phosphatase domain profile. 55 345 IPR001932 -
Gma15g00950 427 CDD PP2Cc 71 345 IPR001932 -
Gma15g00950 427 SUPERFAMILY PP2C-like 44 347 IPR036457 -
Gma15g00950 427 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 34 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00950 Gma-Chr15 7936077 7940064 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00950 1 350 PP2C-type Phosphatase Gene Family AT3G06270 71.143 3.83e-179 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00950 - - gmx:100777670 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00950 15 7936077 7940064 Gma15g00950 15 7936077 7940064 ECH
Gma15g00950 15 7936077 7940064 Gma13g01860 13 33927859 33931592 GST
Gma17g00183 17 1535195 1538226 Gma15g00950 15 7936077 7940064 PCT
Gma15g00950 15 7936077 7940064 Gma17g00183 17 1535195 1538226 PCT