LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma15g00946	ATGGCATCATTGGTAGCCAGTGGTAGCAGTCAAATGGCTCCGTCAGTTTCTGTCCAAGAAAAAGGGAGTAGGAATAAGAGAAAATTCAGGGCTGATCCACCTTTAGGTGAACCAAATAAGATTATTCCTTTACCTCAACATGAAAGCCTCAGCTATGAGTTTTCTGCTGAAAAGTTTGAAATAACCCCAGGTCATGGACAAGTTAGTGCTTCTGGCATGTGCAGTGTAAGCCAAGATCATTCTGATGCGTTGAAGCTTGACCTTGGATTGTCTAGTCCTGTAGCTTCATCTGATGTCAGGATTAGCCAACCAAAGGAGGAACTTGAGGTAGATGAATTCCATGATGCCGATTGGAGTGATCTCACTGAAGCCCAATTGGAAGAACTTGTTCTGAGCAATTTGGACACCATTTTCAAGAGTGCAATTAAAAAAATTGTTGCGTGTGGCTACATTGAAGACGTTGCTACAAAGGCCATCTTAAGGTCTGGCATTTGTTATGGATGTAAAGATGCTGTGTCTAATGTAGTTGACAATGGTTTAGCATTTCTTAGAAATGGCCAAGAGATTAATCCTTCACGAGAGCATTATTTTGAAGATTTAGTGCAACTAGAGAAGTATATTTTGGCTGAATTGGTCTGTGTTCTTCGAGAGGTTAGGCCATTGTTCAGTACCGGGGATGCAATGTGGCGTTTGCTAATTTGTGACATGAACGTGTCACTTGCTTGTGCAATGGATGGTGACCCTTCAAGCAGTTTAGGTAGTGATGGCATTGCTGATGGCTGTTCTTCTGTTCAGACTGAATCACAGTCAAAATTAGAAACAAAAGGTCCTGAATTGAGTCTTCCAAGTCCTTGTAAATCAGTCTCCTCAGGTTCTCAACCTAAGAAATCCTCTGTGGAAGGAAATACTGGTTTGGACAAGTCAAAGAATTCTCAAATTCTTGTTGGACCATCGGAGAAAGAGGCTGCAAATTCTGGACGTGATTCTATTGATAAATCATCTAGTACTTCTGGGACATCTCAATCTCCTTTGGTGGAAGAAAAGTGTGGAAATATTAGAAAGGTCCATTCCAGTAGCACTAAGAGAGACTACATTCTTCGACAAAAGTCATTCCACATGGAAAAAGGCTATCGAACATATGGGTCTAAAGGGTCTTCAAGAGGAGGAAGACTGAATGGTTTAAATGGATTAATCTTGGATAAAAAACTTAAATCTGTATCTGAGCCTACTACCATAAACTTAAAGAGTGCATCCATAAACATAAGTAAGGCAATGGGAGTTGATGTGACACAAGACAATTTAAATGCTGATTTTTCATCTAATGATGGACCATCAACCCCCACTGCATTTAGTCTGGATTCTACTGTTACTGTTTCTCGGTCAACCAACACTTTATCTTCAGTGCACGATGGAAATATACCTGCAGTTGGTAGCTCAAACGTATTATCAGCTACAGATACTAATCTTTCTCTTTCTTTGTCTTCAAATAGTAAGTCTCCTACAACACCTGTCTGCTGCAATAATAAGCCACCTAATAGTAGTTGTATGGGGATACTGCATGACAGGTCCCTGGGGAAGTGGATACCCCAAGATAGAAAGGATGAGATGATTTTGAAGCTAGTTCCAAGGGTTCAGGAGCTGCAAAATCAGCTTCAAGAATGGACAGAGTGGGCAAATCAGAAGGTTATGCAGGCAGCTCGTCGGCTGTGTAAGGATAAGGCTGAGCTTAAGACATTGAGACAAGAGAAAGATGAAGTTGAACGTCTTAAAAAAGAAAAACAATCTCTAGAGGAAAACACTATGAAGAAGATTTCTGAGATGGAAAATGCCTTGTCTAAAGCAAGTGCACAGGTAGAACGAACCAATGCTGATGTCCGGAAATTTGAGGTGGAAAATGCTGCACTGAGGAAAGAGATGGAGGCTGCTAAGTTACGAGCGGCAGAATCAGCCACAAGCTATCAAGAGGTCTCAAGGAGGGAAAAGAAGACCCAAATGAAGTTTCAATCATGGGAGAAGCAGAAATCCTTGTTTCAGGAAGAGCTAATGACTGAAAAACACAAATTGGCTCAGTTGCAGCAAGAATTAGAGCAAGCTAAAGTGCAACAGCAGCAAGTTGAGGCTAGGTGGCAGCAGGCAGCAAAGGCAAAAGAAGAACTCCTCCTGCAGGCCAGTTCTATAAGAAAAGAAAGGGAACAAATTGAGGAGTCAGCAAAATCAAAGGAGGACATGATCAAACTAAAAGCAGAGGAGAATCTGCACAGGTACAGAAATGGCATCCAGAAACTTGAAAAGGAAATTGTGCAACTGAGGCAGAAGACCGACTCTTCCAAAATTGCTGCACTGAGAAGGGGAATTGATGGAAACTATGCCAGCAGCTGTATGGACATGAAAGGCACGGCTCTGAGAGAATCGCAGGCCACTTTTATCTCAGAACTGGTTTCAAATTTAAATGACTGCTCTTTGATAGGGGGTGTAAAACGGGAAAGAGAATGTGTCATGTGCCTTTCTGCGGAGATGTCTGTTGTATTCCTCCCATGTGCTCATCAGGTAGTTTGCACAACATGCAATGAGCTCCATGAGAAACAAGGAATGCAAGACTGTCCTTCTTGCAGGAGCCCCATCCAGAGGCGTATTTTTGTTCGTTTTGCCCGTACATAA	2658	0.4202	MASLVASGSSQMAPSVSVQEKGSRNKRKFRADPPLGEPNKIIPLPQHESLSYEFSAEKFEITPGHGQVSASGMCSVSQDHSDALKLDLGLSSPVASSDVRISQPKEELEVDEFHDADWSDLTEAQLEELVLSNLDTIFKSAIKKIVACGYIEDVATKAILRSGICYGCKDAVSNVVDNGLAFLRNGQEINPSREHYFEDLVQLEKYILAELVCVLREVRPLFSTGDAMWRLLICDMNVSLACAMDGDPSSSLGSDGIADGCSSVQTESQSKLETKGPELSLPSPCKSVSSGSQPKKSSVEGNTGLDKSKNSQILVGPSEKEAANSGRDSIDKSSSTSGTSQSPLVEEKCGNIRKVHSSSTKRDYILRQKSFHMEKGYRTYGSKGSSRGGRLNGLNGLILDKKLKSVSEPTTINLKSASINISKAMGVDVTQDNLNADFSSNDGPSTPTAFSLDSTVTVSRSTNTLSSVHDGNIPAVGSSNVLSATDTNLSLSLSSNSKSPTTPVCCNNKPPNSSCMGILHDRSLGKWIPQDRKDEMILKLVPRVQELQNQLQEWTEWANQKVMQAARRLCKDKAELKTLRQEKDEVERLKKEKQSLEENTMKKISEMENALSKASAQVERTNADVRKFEVENAALRKEMEAAKLRAAESATSYQEVSRREKKTQMKFQSWEKQKSLFQEELMTEKHKLAQLQQELEQAKVQQQQVEARWQQAAKAKEELLLQASSIRKEREQIEESAKSKEDMIKLKAEENLHRYRNGIQKLEKEIVQLRQKTDSSKIAALRRGIDGNYASSCMDMKGTALRESQATFISELVSNLNDCSLIGGVKRERECVMCLSAEMSVVFLPCAHQVVCTTCNELHEKQGMQDCPSCRSPIQRRIFVRFART	885

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma15g00946	885	Coils	Coil	716	743	-	-
	Gma15g00946	885	PANTHER	OS05G0141500 PROTEIN	4	884	-	-
	Gma15g00946	885	MobiDBLite	consensus disorder prediction	1	20	-	-
	Gma15g00946	885	Gene3D	Zinc/RING finger domain, C3HC4 (zinc finger)	822	881	IPR013083	-
	Gma15g00946	885	MobiDBLite	consensus disorder prediction	328	346	-	-
	Gma15g00946	885	Pfam	Family of unknown function (DUF6592)	133	244	IPR046527	-
	Gma15g00946	885	Coils	Coil	674	708	-	-
	Gma15g00946	885	MobiDBLite	consensus disorder prediction	1	43	-	-
	Gma15g00946	885	Coils	Coil	572	645	-	-
	Gma15g00946	885	MobiDBLite	consensus disorder prediction	263	348	-	-
	Gma15g00946	885	Pfam	Zinc finger, C3HC4 type (RING finger)	828	876	-	-
	Gma15g00946	885	Coils	Coil	745	779	-	-
	Gma15g00946	885	ProSiteProfiles	Zinc finger RING-type profile.	831	871	IPR001841	-
	Gma15g00946	885	MobiDBLite	consensus disorder prediction	283	318	-	-
	Gma15g00946	885	PANTHER	OS05G0141500 PROTEIN	4	884	IPR046934	-
	Gma15g00946	885	SUPERFAMILY	RING/U-box	826	879	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma15g00946	Gma-Chr15	7900733	7904804	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma15g00946	-		-	gmx:100777140	1610.89

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma15g00946	15	7900733	7904804	Gma15g00946	15	7900733	7904804	ECH
	Gma15g00946	15	7900733	7904804	Gma13g01864	13	33961656	33966012	GST
	Gma17g00184	17	1540923	1548247	Gma15g00946	15	7900733	7904804	PCT
	Gma15g00946	15	7900733	7904804	Gma17g00184	17	1540923	1548247	PCT