Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00942 ATGACCGATGAACAACGAGAACCACAAGCTTCCCCGAGCAATGGCGTCCACAAGTTAGAAAGAAAACAAATAGCTGAAAGGGAGAGATCGGTTTTTAGAGGCAGGCGTCCACGACCTGGGTTTTCTGATTCATTTTCAAGCGTTGACCTGGAAGCTTTAGAGATTGAAGAGGGCTCTCCTAGGAGTCAAGGGTCTGAAACCCCAAGTTCAAGGGCCAGCACTTCTGATTCGGAGAGTCAGGGATCTTTTGCTGGGACACCTAATAACAATAACCAGTGGCGTGGTTTCTTTAAACTACTCAAGAAAGGATCCCAAATGCCTTTCCAAACTTTTCACCCACTTAAAAATGTTCCAAAACTGACAAGAAGAAAAAGCAAGAGAATCAGGGAGGACCTCATTCCATCACTGAATGCAGCATCTCTTGACACTGAGTTTGGCTGCTTCAAATCTTCCTGGAAAAACTTCACCCTCGCGGAGATCCAGGCTGCAACTGATGACTTTAGCCATGAAAATTTGATTGGGGAGGGAGGCTATGCTGAGGTTTACTTGGGCAAATTGGAGGATGGAAACTTTGTTGCCATTAAACGGTTGACAAGAGGGTGCCAAGAAGAAATGACTGCAGATTTCTTGTCTGAGCTTGGCATTATAGTGCACGTGGACCACCCCAACATAGCTAGATTGATTGGATATGGTGTTGAAGGAGGAATGTTTCTTGTTCTTCAATTGTCTCCACATGGTAGCCTGTCATCCATACTTTATGGACCTAGAgagaaactgaattggagcctcagatataagattgctatggggactgctgagggccttcgctatctgcatgaggggtgtcaaagaaggatcattcacaaagacatcaaggcttctaatattcttctCTCAGAGGATTTTGAGCCTCAGATATCTGATTTTGGGCTTGCAAAGTGGTTACCTGACCAATGGACTCACCATACTGTCTCAAAAGTGGAAGGCACATTCGGCTACCTTCCTCCTGAATTCTTCATGCATGGTATAGTAGATGAAAAGACAGATGTCTATGCTTATGGTGTACTATTATTGGAGCTCATTACTGGTCGACAAGCTTTGGATAGCTCACAGAAAAGTCTGGTGATGTGGGCAAAACCTTTGCTAACTGCAAATAACATCAAAGAGCTTGTGGATCCAGTTTTGGCTGATGCTTATGATGAAGAGCAGATGAAGCTTGTAACCTTAACAGCTTCTCTCTGTGTAGACCAGTCCTCAATTCAGCGACCGGTGTTAGATATACTAAGAGGGGAAGAAGAGAGCTTAAGAATCATGAAAGAACGATCGAAGTCAAAACTTCAGAGGACATACTCTGAAGAACTCTTAGATGCAGAAGAGTACAACTCAACAAAGTTTTTGAGTGAGAGGGATCGACATATGGAGACTATTCTAGGCTGCAGTAGCTCTGTTACAGAAGATGAGGATAAAATCTAG 1473 0.3999 MTDEQREPQASPSNGVHKLERKQIAERERSVFRGRRPRPGFSDSFSSVDLEALEIEEGSPRSQGSETPSSRASTSDSESQGSFAGTPNNNNQWRGFFKLLKKGSQMPFQTFHPLKNVPKLTRRKSKRIREDLIPSLNAASLDTEFGCFKSSWKNFTLAEIQAATDDFSHENLIGEGGYAEVYLGKLEDGNFVAIKRLTRGCQEEMTADFLSELGIIVHVDHPNIARLIGYGVEGGMFLVLQLSPHGSLSSILYGPREKLNWSLRYKIAMGTAEGLRYLHEGCQRRIIHKDIKASNILLSEDFEPQISDFGLAKWLPDQWTHHTVSKVEGTFGYLPPEFFMHGIVDEKTDVYAYGVLLLELITGRQALDSSQKSLVMWAKPLLTANNIKELVDPVLADAYDEEQMKLVTLTASLCVDQSSIQRPVLDILRGEEESLRIMKERSKSKLQRTYSEELLDAEEYNSTKFLSERDRHMETILGCSSSVTEDEDKI 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00942 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 286 298 IPR008271 GO:0004672|GO:0006468
Gma15g00942 490 PANTHER OS08G0249100 PROTEIN 33 466 - -
Gma15g00942 490 Pfam Protein tyrosine and serine/threonine kinase 170 375 IPR001245 GO:0004672|GO:0006468
Gma15g00942 490 MobiDBLite consensus disorder prediction 1 90 - -
Gma15g00942 490 ProSitePatterns Protein kinases ATP-binding region signature. 173 195 IPR017441 GO:0005524
Gma15g00942 490 MobiDBLite consensus disorder prediction 19 36 - -
Gma15g00942 490 MobiDBLite consensus disorder prediction 60 90 - -
Gma15g00942 490 ProSiteProfiles Protein kinase domain profile. 167 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00942 490 SMART serkin_6 167 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00942 490 SUPERFAMILY Protein kinase-like (PK-like) 152 402 IPR011009 -
Gma15g00942 490 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 ISOFORM X1 33 466 - -
Gma15g00942 490 Gene3D Phosphorylase Kinase; domain 1 133 241 - -
Gma15g00942 490 Gene3D Transferase(Phosphotransferase) domain 1 244 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00942 Gma-Chr15 7859179 7862732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00942 139 432 Receptor kinase-like Gene Family AT1G53420 38.562 3.25e-65 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Gma15g00942 PK_Tyr_Ser-Thr 2.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00942 - - gmx:100776081 949.118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00942 15 7859179 7862732 Gma15g00942 15 7859179 7862732 ECH
Gma15g00942 15 7859179 7862732 Gma03g02223 03 47556379 47566552 ECH
Gma15g00942 15 7859179 7862732 Gma10g01549 10 42566487 42577405 ECH
Gma15g00942 15 7859179 7862732 Gma02g01373 02 15903121 15906859 ECH
Gma15g00942 15 7859179 7862732 Gma10g00224 10 2060473 2064206 ECH
Gma15g00942 15 7859179 7862732 Gma03g01370 03 39872119 39874639 ECH
Gma15g00942 15 7859179 7862732 Gma19g01436 19 43631927 43634815 ECH
Gma15g00942 15 7859179 7862732 Gma13g01868 13 33996470 33999884 GST