Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00914 ATGGCGAGACCTTCCAAGCTACACTCATCTTCCGACGAAGCGCTCTCCAATGCTTCGAGTTCCTCCGATGAAGAGGAGCAAGTCAACGAGCAGATCAACGAAGAGGAAGACGAGGAGGAGCTCGAGGCGGTGGCGCGCCCTGCCAGTTCTGCTGACGACGACGACGAAGTCGCCGGCGACAATCCGCCGGACTCCGATGAAGATCCAGCCGCCGATGACGCTGACGATGACCAGGATGGGGATAATGTTGATCCCGAAATTAGCAAGCGAGAGAAGGCGAGATTAAAAGAAATGCAGAAAATGAAGAAACAGAAGATTCAGGAGATACTGGATGTACAGAATGCGGCCATTGACGCTGACATGAACAATAGAGGGAAGGGGCGTCTGAAGTATCTCTTGCAGCAGACTGAGCTGTTTGCTCATTTTGCAAAAGGGGATCAATCTTCGTCTCAGAAGAAGTCAAGGGGAAGGGGTCGCCATGCATCCAATTTCACCGAGGAAGAAGAAGATGAAGAATACCTAAAAGGAGAAGAAGATGGTCTAGCAAACACACGTCTGGTGACACAACCATCATGTATCCAAGGGAAAATGAGGGATTACCAGCTGGCTGGACTAAACTGGCTCATACGATTGTATGAGAATGGAATAAATGGAATTCTGGCTGATGAAATGGGGCTTGGTAAAACATTGCAAACTATATCCTTATTAGGTTATTTGCACGAGTTCCGAGGAATCAAAGGTCCTCATATGGTGGTTGCTCCAAAATCTACTCTTGGAAATTGGATGAATGAGATTCGGCGCTTTTGTCCTGTTCTTCGTGCAATCAAGTTTCTTGGCAACCCCGATGAAAGGAGACATATCAGAGATGAATTGTTGGTTGCCGGGAAGTTTGATGTTTGTGTCACAAGTTTTGAAATGGCAATCAAGGAGAAGTCTGCTTTGCGTCGATTTAGTTGGCGCTACATAATTATTGATGAAGCTCATCGAATCAAGAATGAGAATTCCTTGCTGTCCAAAACAATGAGGCTCTACAGTACAAACTACCGTCTCCTTATTACTGGCACGCCACTTCAGAATAACCTTCATGAACTCTGGTCTCTTCTCAACTTTCTTCTGCCCGAAATTTTTAGTTCTGCTGAAACTTTTGATGAATGGTTTCAAATCTCTGGTGAAAATGATCAACAGGAGGTTGTTCAACAATTACACAAGGTCCTCCGACCATTTCTCCTTCGAAGGTTGAAGTCAGATGTTGAGAAAGGATTGCCACCAAAAAAGGAAACTATTCTTAAAGTAGGCATGTCCCAAATGCAGAAACAGTATTATAGAGCCCTACTTCAGAAGGATCTTGAGGTTGTAAACGCTGGTGGTGAACGGAAGCGCCTCCTGAACATAGCTATGCAACTCCGCAAATGTTGTAATCATCCATATCTTTTCCAAGGTGCTGAACCTGGTCCTCCCTTCACTACAGGAGATCATCTTATTGAAAACGCTGGTAAAATGGTTCTTTTGGATAAGTTACTTCCTAAATTGAAAGAGCGCGATTCTAGGGTCCTTATATTTTCACAGATGACTAGGCTGCTAGACATACTCGAAGATTATTTAATGTTTCGTGGATATCAATATTGTCGCATTGATGGAAATACTGGTGGGGATGATCGAGATGCTTCCATTGATGCTTTCAACAAACCAGGAAGTGAGAAATTTGTCTTCTTGTTATCAACTCGTGCTGGAGGTCTTGGTATTAATCTTGCTACTGCTGATGTTGTCATTCTGTACGATAGTGACTGgaacccacaagttgacttgcaggctcaggatcgtgctcataggattggtcaaaagaaagaagtTCAAGTTTTCCGATTTTGTACTGAGTATACAATAGAAGAGAAAGTCATTGAAAGGGCCTACAAAAAGCTTGCACTTGATGCTCTGGTGATTCAGCAAGGGCGATTGGCTGAGCAGAAGACGGTAAATAAAGATGAATTGCTTCAAATGGTTAGATTTGGGGCTGAAATGGTTTTCAGTTCCAAGGATAGTACAATTACAGATGAAGATATTGATAGAATTATTGCTAAAGGAGAGGAGGCAACTGCTGAGCTAGATGCCAAGATGAAGAAATTTACTGAAGATGCCATCAAATTTAAGATGGATGACACTGCCGAGTTATATGATTTTGATGATGAGAAGGATGAAAGCAGATTTGATATAAAAAAAATTGTGAGTGAGAACTGGATTGAACCACCCAAAAGGGAGCGGAAGCGCAATTACTCAGAGTCTGAATACTTCAAGCAAACAATGCGCCAAGGTGGTCCTACCAAACCAAAAGAGCCCCGTATTCCTAGGATGCCCCAGTTGCATGATTTCCAATTTTTCAACACACAAAGGTTGAGTGAGCTGTATGAAAAGGAAGTACGCTATCTCATGCAAACACACCAGAGGAATCAGATAAAGGATTCAATAGATGTTGATGAACCAGAAGAGGTGGGAGATCCATTGACAGCTGAAGAGTTGGAAGAAAAGGAGCGCTTGCTAGAAGAGGGATTTTCTTCATGGAGCCGGAGGGATTTTAATACTTTCATTAGGGCCTGCGAAAAATATGGCCGAAATGATATACAAAGTATTGCTTCTGAGATGGAAGGAAAAACCGAGGAGGAAGTTGAAAGATATGCAAAGGTCTTTAAAGAAAGATACAAGGAATTAAATGATTATGACAGAATTATTAAAAACATTGAAAGGGGGGAGGCAAGAATTTCTCGGAAAGATGAGATCATGAAAGCTATTGGAAAGAAGTTGGACCGCTACAAGAATCCGTGGCTAGAGTTGAAGATACAGTATGGGCAAAACAAAGGGAAGTTGTACAATGAAGAATGTGACAGATTCATGATATGCATGGTGCACAAACTTGGCTATGGGAACTGGGATGAGTTAAAGGCAGCATTTCGAACATCACCCTTGTTTCGATTTGATTGGTTTGTCAAATCTCGCACCACTCAAGAACTGGCTAGGAGGTGTGACACCCTCATTCGACTGGTAGAAAAGGAAAACCAAGAATATGATGAGAGGGAGAGACAAGCTCGCAAAGAGAAGAAACTTGCCAAAAGCATGACCCCATCGAAGCGTGCTTTGGCAAGACAGACAGAGAGTCCATCTTCTTTGAAGAAGCGCAAGCAGTTAACCATGGACGATTATGCAAGCACGGGGAAGAGAAGAAAATAA 3219 0.4203 MARPSKLHSSSDEALSNASSSSDEEEQVNEQINEEEDEEELEAVARPASSADDDDEVAGDNPPDSDEDPAADDADDDQDGDNVDPEISKREKARLKEMQKMKKQKIQEILDVQNAAIDADMNNRGKGRLKYLLQQTELFAHFAKGDQSSSQKKSRGRGRHASNFTEEEEDEEYLKGEEDGLANTRLVTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGIKGPHMVVAPKSTLGNWMNEIRRFCPVLRAIKFLGNPDERRHIRDELLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPFTTGDHLIENAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYQYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIKFKMDDTAELYDFDDEKDESRFDIKKIVSENWIEPPKRERKRNYSESEYFKQTMRQGGPTKPKEPRIPRMPQLHDFQFFNTQRLSELYEKEVRYLMQTHQRNQIKDSIDVDEPEEVGDPLTAEELEEKERLLEEGFSSWSRRDFNTFIRACEKYGRNDIQSIASEMEGKTEEEVERYAKVFKERYKELNDYDRIIKNIERGEARISRKDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLVEKENQEYDERERQARKEKKLAKSMTPSKRALARQTESPSSLKKRKQLTMDDYASTGKRRK 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00914 1072 CDD SF2_C_SNF 498 623 - -
Gma15g00914 1072 Gene3D ISWI, HAND domain 749 847 IPR036306 GO:0003677|GO:0006338|GO:0031491
Gma15g00914 1072 SUPERFAMILY Homeodomain-like 851 901 IPR009057 -
Gma15g00914 1072 MobiDBLite consensus disorder prediction 143 173 - -
Gma15g00914 1072 MobiDBLite consensus disorder prediction 1020 1072 - -
Gma15g00914 1072 Coils Coil 1005 1032 - -
Gma15g00914 1072 Gene3D - 198 413 IPR038718 -
Gma15g00914 1072 CDD DEXHc_SMARCA1_SMARCA5 194 414 IPR044754 GO:0005524
Gma15g00914 1072 MobiDBLite consensus disorder prediction 1 92 - -
Gma15g00914 1072 MobiDBLite consensus disorder prediction 9 26 - -
Gma15g00914 1072 Coils Coil 15 42 - -
Gma15g00914 1072 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 412 IPR027417 -
Gma15g00914 1072 Pfam Helicase conserved C-terminal domain 500 612 IPR001650 -
Gma15g00914 1072 MobiDBLite consensus disorder prediction 1050 1072 - -
Gma15g00914 1072 CDD SANT 851 895 IPR001005 -
Gma15g00914 1072 Gene3D - 418 710 IPR027417 -
Gma15g00914 1072 SUPERFAMILY Homeodomain-like 903 1025 IPR009057 -
Gma15g00914 1072 MobiDBLite consensus disorder prediction 756 777 - -
Gma15g00914 1072 PANTHER SNF2/RAD54 HELICASE FAMILY 9 1072 - -
Gma15g00914 1072 Coils Coil 88 115 - -
Gma15g00914 1072 Pfam SNF2-related domain 210 477 IPR000330 GO:0005524|GO:0140658
Gma15g00914 1072 Gene3D iswi atpase 903 935 - -
Gma15g00914 1072 SUPERFAMILY HAND domain of the nucleosome remodeling ATPase ISWI 760 850 IPR036306 GO:0003677|GO:0006338|GO:0031491
Gma15g00914 1072 Pfam SLIDE 905 1015 IPR015195 GO:0003677|GO:0005634|GO:0006338
Gma15g00914 1072 PANTHER REMODELING FACTOR, PUTATIVE-RELATED 9 1072 - -
Gma15g00914 1072 ProSiteProfiles SANT domain profile. 847 899 IPR017884 -
Gma15g00914 1072 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 414 695 IPR027417 -
Gma15g00914 1072 SMART helicmild6 528 612 IPR001650 -
Gma15g00914 1072 MobiDBLite consensus disorder prediction 54 82 - -
Gma15g00914 1072 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 209 374 IPR014001 -
Gma15g00914 1072 SMART ultradead3 193 385 IPR014001 -
Gma15g00914 1072 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 502 653 IPR001650 -
Gma15g00914 1072 MobiDBLite consensus disorder prediction 27 42 - -
Gma15g00914 1072 Gene3D - 848 902 - -
Gma15g00914 1072 SMART sant 848 897 IPR001005 -
Gma15g00914 1072 SMART sant 950 1011 IPR001005 -
Gma15g00914 1072 Pfam HAND 761 843 IPR015194 GO:0003677|GO:0006338|GO:0031491
Gma15g00914 1072 Gene3D - 936 1039 - -
Gma15g00914 1072 MobiDBLite consensus disorder prediction 1020 1036 - -
Gma15g00914 1072 MobiDBLite consensus disorder prediction 148 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00914 Gma-Chr15 7611426 7619337 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00914 218 639 RAD5 or RAD16-like Gene Family AT1G02670 26.931 8.10e-41 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Gma15g00914 SNF2_N 1.2e-71 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00914 K11654 - gmx:100809750 2032.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00914 15 7611426 7619337 Gma15g00914 15 7611426 7619337 ECH
Gma15g00914 15 7611426 7619337 Gma13g01898 13 34299060 34307642 GST
Gma17g00213 17 1738493 1748083 Gma15g00914 15 7611426 7619337 PCT
Gma15g00914 15 7611426 7619337 Gma17g00213 17 1738493 1748083 PCT