Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00905 ATGTTCGGTCACTATCGCAGGGCATTGCTCTGCTTCAAGCACAACCCAAACTCCATCACTGCAATCTCCACACCCTTCTCTATTCTTCTCCGATCATTCTCCACTTCCTCTTCCGACCATAAACAGCAACACTCATTCACCTTAAACTACCTCCTCAACACCTTCGGCTTCTCCCCAGAAACCGCCTCAAAACTCTCCACCCGAATCCGCCTCGAAACCTCCCACGACCCCGACTCAATCCTCTCCCTCTTCAAATCCCATGGCTTCTCCGACGCCCAAATCCGCCGCATCATCCAAACATACCCTTACTTCCTCTCCTACAACGCCCGCAAAACCATCCTCCCCAAACTCACCTTCCTCCTCTCCAAAGGCGCCTCCACCTCCGACCTCGTTCGCATCGTCACCAAAAACCCTAGAATCCTCCACTTCGATCTCCACAACGCCATCACCCCGCGCTACGACTTCATCAAAAAATTCATGCTTTCCGATGATTCCACCCTCCGCTCCATCAAATCATGCCCCAGCATCATCTTTTCGAACACCCCCCTCCTCAACATTCAATTTCTCCTCCACAACGATGTCCCGGAATCCAAGGTTGTTATGTTGCTTCGCTACTGGGCCTGCTCGCTCGTTGCCAATGCCCCCACGTTTCAGGATGCGGTTCGGGAGGTTATGGAATTGGGCTTCAGGCCCAACAAAACGTTGTTCTTGGTGGCACTTCGTGCTAAGCTTGTGAGGAAATCGTTGTGGGAGAGGAAGGTTGAGGTGTATAGGAAATGGGGCTGGTCTGAGGAGATTCTGCTTTCCACGTTTCTGAGGAACCCCTGGTGTATGCTGGTCTCTGAGAAGAAAATTGAGGCCATGATGGAGTTTTTTATTACTCATTTGGGTTTGGATTCTTTGTGTTTTGCTAAGCATCCCGTGCTTATTGCGTTGAGCTTGGAGAAAAGGGTTGTTCCCAGGGCTTCTGTGTTGCAGTTTCTTTTGGCGAAAGGTTTGCTTAAGGATGTTAATTGGGCGTCCGCGTTTATAGTTACTGATAAGATTTTCTTGCAGAAATTTGTGGTTTCCTATGAGAAGGAAGCCGATCAGCTGTTGAAGCTCTATGAAGAGAAGAGAGATGTTCCTAGAGAAGAGAGATGTTGA 1146 0.4939 MFGHYRRALLCFKHNPNSITAISTPFSILLRSFSTSSSDHKQQHSFTLNYLLNTFGFSPETASKLSTRIRLETSHDPDSILSLFKSHGFSDAQIRRIIQTYPYFLSYNARKTILPKLTFLLSKGASTSDLVRIVTKNPRILHFDLHNAITPRYDFIKKFMLSDDSTLRSIKSCPSIIFSNTPLLNIQFLLHNDVPESKVVMLLRYWACSLVANAPTFQDAVREVMELGFRPNKTLFLVALRAKLVRKSLWERKVEVYRKWGWSEEILLSTFLRNPWCMLVSEKKIEAMMEFFITHLGLDSLCFAKHPVLIALSLEKRVVPRASVLQFLLAKGLLKDVNWASAFIVTDKIFLQKFVVSYEKEADQLLKLYEEKRDVPREERC 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00905 381 SMART mt_12 300 334 IPR003690 GO:0003690|GO:0006355
Gma15g00905 381 SMART mt_12 268 299 IPR003690 GO:0003690|GO:0006355
Gma15g00905 381 SMART mt_12 95 126 IPR003690 GO:0003690|GO:0006355
Gma15g00905 381 SMART mt_12 131 162 IPR003690 GO:0003690|GO:0006355
Gma15g00905 381 PANTHER OS04G0637500 PROTEIN 34 372 - -
Gma15g00905 381 PANTHER CGI-12 PROTEIN-RELATED 34 372 IPR003690 GO:0003690|GO:0006355
Gma15g00905 381 Coils Coil 355 375 - -
Gma15g00905 381 Pfam mTERF 81 300 IPR003690 GO:0003690|GO:0006355
Gma15g00905 381 Gene3D Transcription termination factor 3, mitochondrial 182 368 IPR038538 -
Gma15g00905 381 Gene3D Transcription termination factor 3, mitochondrial 42 181 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00905 Gma-Chr15 7549043 7550570 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma15g00905 mTERF 2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00905 K15032 - gmx:102663105 751.51