Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00890 ATGGGGAGGCTAATAAGAACTTCTAAACCTCTTATCTTCCACTCAAAGCTCCTCTGTTTTTCTCTGTTCTATCTCTTCACCACTCTGTTCCTTGCTCTCTACACCTCTCTGTCCCAATCCAAATGTTTCTTCCGATCGTCCCCTTCGGATCCCGTTCAGAATTCTCTCTTCTCTTACCCTTCTTCCTATGGGGAGCACAAGTACGCTGTGTCAACCACCCGTTCTACATGTTCTTCCCCTGTTTTCTTTTCAGATTACTCGGATGTTGTGAAGGAGATCAAGAATTGCCGCAATAACAATGTAGGCTATTCAGGGGCTCTGCGGTATATGCAAGGGAATTTGGATAGTTTTGGGGGGAATCTCAACACCCTTTCGAGGTTTTCTTATTTTGATCACCAAAATGATAGCACGGAAGTTCCATGCGGATTTCTGAAGAAATTTCCAATTAGTGATTCCGATCGAATTGCGATGGAGAAGTGTGACAGTGTGGTTGTGGTTTCAGCAATCTTCAATGATCATGATAAAATTCGTCAACCGAAGGGCCTTGGGTCCAATACATTGCAAGAAGTGTGTTTTTTTATGTTTGTAGATGATGTTACCCTCAAAGGTCTTGAACATCATGGATTGGTTTCAATAAATTCAAGAGAATACAAGATAGGTGTATGGAGGATTGTGAAGGTTGCAAAAGAGAATTTGTATCAGAACCCAGCAATGAATGGGGTTATACCAAAGTATTTAGTCCATAGGTTATTCCCACATTCCCACTTCAGCATTTGGATAGACGCAAAGTTGCAACTAATGGTTGATCCGTTATTGTTGATTCATTCTCTTGTTATATCTAAAAATGTAGACATGGCTATATCAAAACACCCTTATTATGTTCATACCATGGAAGAAGCAATGGCAACTGCAAGATGGAAGAAATTGTTGGATGTCAACGCCTTGAAGGAACAAATGGAGACATACTGTGAAAATGGATTGCAACCATGGAGTCCCAACAAACAACCCTATGTGTCAGATGTACCAGATAGTGCTTTGATATTAAGGAGGCATGGACTTGGCAGTAACCTCTTCTCCTGCCTCATATTCAATGAGTTGCAGGCATTTAACCCAAGAGACCAATTGCCTTTTGCATTTGTTAGAGATCACATGAAGCCCAACCTGAAGCTGAACATGTTTGAGGTAGAAGTTTTTGAACAGGTGGCAGTGGAGTACAGACACAATCTCAAGAGCAGTGATGGGACCACTGTGAAGAAAGTGTTCAGTTCAGGAAGAACCAAAAGGGCACACCCTGATTTGTTGTATGTGAATGGAAGTTGTTGCAGCAAGTGCCAAAAGTATCTTTCTATAATGTGGGGGGAATCATCAAATGATTAA 1377 0.4132 MGRLIRTSKPLIFHSKLLCFSLFYLFTTLFLALYTSLSQSKCFFRSSPSDPVQNSLFSYPSSYGEHKYAVSTTRSTCSSPVFFSDYSDVVKEIKNCRNNNVGYSGALRYMQGNLDSFGGNLNTLSRFSYFDHQNDSTEVPCGFLKKFPISDSDRIAMEKCDSVVVVSAIFNDHDKIRQPKGLGSNTLQEVCFFMFVDDVTLKGLEHHGLVSINSREYKIGVWRIVKVAKENLYQNPAMNGVIPKYLVHRLFPHSHFSIWIDAKLQLMVDPLLLIHSLVISKNVDMAISKHPYYVHTMEEAMATARWKKLLDVNALKEQMETYCENGLQPWSPNKQPYVSDVPDSALILRRHGLGSNLFSCLIFNELQAFNPRDQLPFAFVRDHMKPNLKLNMFEVEVFEQVAVEYRHNLKSSDGTTVKKVFSSGRTKRAHPDLLYVNGSCCSKCQKYLSIMWGESSND 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00890 458 Pfam Protein of unknown function (DUF616) 113 407 IPR006852 -
Gma15g00890 458 PANTHER OS01G0210400 PROTEIN 1 455 - -
Gma15g00890 458 PANTHER ALKALINE CERAMIDASE-RELATED 1 455 IPR006852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00890 Gma-Chr15 7404993 7408112 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00890 - - gmx:100809755 907.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00890 15 7404993 7408112 Gma15g00890 15 7404993 7408112 ECH
Gma15g00890 15 7404993 7408112 Gma13g01922 13 34508104 34511233 GST
Gma15g00890 15 7404993 7408112 Gma05g01632 05 38077121 38084640 PCT
Gma15g00890 15 7404993 7408112 Gma08g01116 08 9481926 9489261 PCT