Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00880 ATGAGGAGGAACTGCAACTTGGAACTCGCCCTTTTTCCTCCCTCTGATTCTGGCCCCCCCATGGTTGACAACGTTGAAGAAGAGGCTAGTGAAATCAGCCCAATGCAAAATTTGTTCCACCGCCAGGAACAGCAACAGCCGCTCACCATTTTCTATGATGGAAAGATTTGTGTTGCGGATGTCACAGAGCTTCAGGCCAAATCGATTTTAATGCTTGCAAATAGAAAATTGGAGGAAAGAGTGAGGACACCAACTGGGTCAGAGCCATCTTCACCAACAGTGATGCAATCTAATAATCAATTGTATAGTCCTGGCACTGGCCCTTCCATGAGAAAATCGTTGCAAAGGTTCCTTCAGAAGAGAAGGAATCGGGTCCAAGAAGCATCGCCATACCGTCACTAG 402 0.4677 MRRNCNLELALFPPSDSGPPMVDNVEEEASEISPMQNLFHRQEQQQPLTIFYDGKICVADVTELQAKSILMLANRKLEERVRTPTGSEPSSPTVMQSNNQLYSPGTGPSMRKSLQRFLQKRRNRVQEASPYRH 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00880 133 PANTHER - 1 133 - -
Gma15g00880 133 Pfam Jas motif 111 131 IPR018467 -
Gma15g00880 133 SMART tify_2 41 75 IPR010399 -
Gma15g00880 133 Pfam tify domain 43 74 IPR010399 -
Gma15g00880 133 ProSiteProfiles Tify domain profile. 41 75 IPR010399 -
Gma15g00880 133 MobiDBLite consensus disorder prediction 84 113 - -
Gma15g00880 133 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 133 IPR040390 -
Gma15g00880 133 MobiDBLite consensus disorder prediction 79 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00880 Gma-Chr15 7300596 7303428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00880 1 131 Tify Gene Family AT1G30135 43.609 4.22e-27 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gma15g00880 tify 3.2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00880 - - gmx:100803886 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00880 15 7300596 7303428 Gma15g00880 15 7300596 7303428 ECH
Gma15g00880 15 7300596 7303428 Gma13g01932 13 34624212 34627474 GST