Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00874 ATGCTTCTTAGCTTTGGTCTTGGATTTAAGGTTCACAGATCTGTGAGCTTAAAAACAAAGCGCAAACACTTGGATCAAAGGAGGGGGGGTGAGGCTGAGGCTCTGAGACCTACTCAGTCTTCTTTTGCTTTTGAAAGGGCTTTTCTTTTCTTTCTTTCTGCGATTGAGAAAAAAGCTTTAACAAGGGGGCTTCTGACTCGGACCGCGATTTATCGGCGTGACTGTGATATGGAGGAGGATGAGATTCAAGCATGTAAGTTCCCTAGAGTTGGAAATGGTAGGAGTAGTGACCAATACCAAGAGGAGGAAGAAGAGGGTGACCTAAGAAGAAAAGGTGTTGGTGGTGGTGGTGGAAGTGATGCTAGCACAAACCACTTCCACCAAAGTAGTTGGCACTACTCTTCTAGAATCATAAGGGTGTCTCGAGCATCTGGTGGCAAAGACAGGCACAGCAAAGTGATGACCTCAAAAGGGTTAAGAGACAGAAGGGTTAGGCTCTCTGTGACCACAGCTATTCAGTTCTATGACCTTCAAGATCGCTTGGGTTACGACCAACCTAGCAAAGCTGTGGAGTGGCTAATCAAAGCTGCTTCAGAAGCTATCTCTGAGCTTCCTTCTCTCAACAACCCTTTCCCTGATACCCCTAAGCAGCCTAGTGATGAGAAAAGGCCTACCAGTGGTGGTGGTCAACAACAACAACAACAAGGCTTTGATGATGCAGATGGAGACACAAATTACCAACAAAACCAAAGCCAGAATCTTTCTCTCTCCAAGTCTGCTTGTAGCAGCACTTCCGAGACAAGCAAGGGCTCAGGCTTGTCCCTCTCAAGGTCTGAGATCCGTGTGAACCGTGTGAAGGCAAGGGAGAGGGCAAGGGAGAGAGCAGCAAAAGAGAAGGAGAAGGAGAAAGAGAAAGAGAGTGATTTTAACATTGCACACCACCATCACCACCACAATGTGAACAACATGTCTCACACTGCTTCCTTCACTGAGCTTCTCACTGGTGGGATTGGGAGCACGGTAACAGTTAACCCcaacacaacaacaacaacaacaacaacagcaacaaGTCCTAATGGATCATCGGTTCATCAGATCCATGAGGGTCATGATCATGAGGCTAATCTATTCAACAAGGGAAGTCAACAACAGCAACAGCAACAACATCACCATTGGTCTCAAACAGTGACACCTATGGACTACTTCAGCGCAGGCCTCTTGGTAGGACCTTCATCATCTGCAAGTACTCAACAACACCAATCTTCAGGACAGTTCCAACTGGGACATGGACATGCACATGCACATGCTCTTTCAATCTCACCATTTAGTGGAGAAAACCACTCGGAGCAAATGCAGCATTTTTCCTTCATGCCAGACCATCTCAACAACATGCCATCTTCTGCTGCTTCTGCTTCTCAACACAGCGAGGGTGACAATAACAACTACAACCTCAACTTCAGCATCTCTTCGTCGGGCCTTGCTGGTTACAATAGGGGGACCCTTCAGTCCAATTCTCCGTCTTCCTCGTTTTTGCCTCTCCTTCAGAGTTCTCACCCATCTTTGATGGCCGCTTGCAACTTTGCTATGGCGATGGAACAAGGCAGCATTCTGATCACAAGGGGAAGGGAAAGAACTAAGTTCCCCCGAGGAGCACCACTTTTGTTCCTGGAATTGTGGTCTTTGTTTTTTTAG 1692 0.4616 MLLSFGLGFKVHRSVSLKTKRKHLDQRRGGEAEALRPTQSSFAFERAFLFFLSAIEKKALTRGLLTRTAIYRRDCDMEEDEIQACKFPRVGNGRSSDQYQEEEEEGDLRRKGVGGGGGSDASTNHFHQSSWHYSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAASEAISELPSLNNPFPDTPKQPSDEKRPTSGGGQQQQQQGFDDADGDTNYQQNQSQNLSLSKSACSSTSETSKGSGLSLSRSEIRVNRVKARERARERAAKEKEKEKEKESDFNIAHHHHHHNVNNMSHTASFTELLTGGIGSTVTVNPNTTTTTTTTATSPNGSSVHQIHEGHDHEANLFNKGSQQQQQQQHHHWSQTVTPMDYFSAGLLVGPSSSASTQQHQSSGQFQLGHGHAHAHALSISPFSGENHSEQMQHFSFMPDHLNNMPSSAASASQHSEGDNNNYNLNFSISSSGLAGYNRGTLQSNSPSSSFLPLLQSSHPSLMAACNFAMAMEQGSILITRGRERTKFPRGAPLLFLELWSLFF 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00874 563 MobiDBLite consensus disorder prediction 204 308 - -
Gma15g00874 563 MobiDBLite consensus disorder prediction 204 278 - -
Gma15g00874 563 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 77 520 IPR005333 GO:0003700
Gma15g00874 563 Pfam TCP family transcription factor 145 301 IPR017887 -
Gma15g00874 563 ProSiteProfiles TCP domain profile. 146 204 IPR017887 -
Gma15g00874 563 ProSiteProfiles R domain profile. 281 299 IPR017888 -
Gma15g00874 563 MobiDBLite consensus disorder prediction 281 308 - -
Gma15g00874 563 MobiDBLite consensus disorder prediction 457 476 - -
Gma15g00874 563 MobiDBLite consensus disorder prediction 96 111 - -
Gma15g00874 563 PANTHER TRANSCRIPTION FACTOR TCP24 77 520 - -
Gma15g00874 563 MobiDBLite consensus disorder prediction 93 126 - -
Gma15g00874 563 MobiDBLite consensus disorder prediction 408 432 - -
Gma15g00874 563 MobiDBLite consensus disorder prediction 408 427 - -
Gma15g00874 563 Coils Coil 285 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00874 Gma-Chr15 7228011 7238918 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00874 129 515 TCP Transcription Factor Family AT4G18390 43.210 7.09e-63 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma15g00874 TCP 2.8e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00874 - - gmx:100806032 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00874 15 7228011 7238918 Gma15g00874 15 7228011 7238918 ECH
Gma15g00874 15 7228011 7238918 Gma13g01940 13 34680699 34689450 GST