Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma15g00873 | CTCTGTGCTATACTTTTACATCAGTGAGGTTGTTGGCCAGGTTTTGTTTGGAATACTATTGCTTGTGTATGTTCCTACTTTGGATCCTTATCCAGGTTATACCCCCATTGGGACTGAGATGATTACTGATGCTACATATGATGAACTCCCTGGAGGAGATATGATATGTCCCGAGAGGAGTGCCAACATATTGTCAAGAATAATGTTTTCTTGGATGAATCCCATCATGAAACTAGGATATGAGAGACCACTAACTGAGAAAGATATATGGAAATTAGATACATGGGAACGGACAGAGACACTGATCAATAAGTTCCAGAAATGTTGGGTTGAGGAGTCTCGGAAGTCAAAACCTTGGCTTTTAAGAGCATTAAATGCAAGTCTTGGAGGAAGGTTTTGGTGGGGAGGCTTTTGCAAGATTGGCAATGATATTTCCCAATTTATGGGCCCACTTATATTGAATCAGCTGCTACAGTCTATGCAAAATGGTGAACCATCCTGGACTGGCTATGTTTATGCCTTCTCAATATTTGTTGGAGTGGTCTTTGGGGTGTTATGTGAAGCTCAATATTTTCAGAATGTCATGCGTGTTGGTTACCGGTTAAGATCAACATTGGTGGCTGCTGTATTTCGCAAGTCCCTAAGGCTTACTCATGAAGCACGAAAGCAATTTGCAACTGGAAAAATAACCAACTTAATGACTACTGATGCTGAGGCACTTCAGCAAATATGCCAGTCACTTCACACTCTCTGGTCAGCTCCAGTACGAATTGTTGTTGCTATGGTTCTTCTTTACCAACAACTTGGTGTTGCTTCCCTTCTTGGTGCTTTGATGCTAGTTCTTATGTTCCCATTACAGCAGACATTTATCATTAGCAGAATGCAGAAGTTATCTAAGGAAGGATTACAACGTACAGACAAAAGAATTGGTCTCATGAATGAAATTTTGGCTGCTATGGACACCTTAAAGTATTATGCATGGGAGAGTAGTTTCCAGTCTAAAGTACAGATTGTCCGAGATGATGAATTATCTTGGTTTCGGAAAGCATCATTACTAGGAGCGTGTAATGGATTTATTCTAAATAGCATTCCAGTTTTTGTAACTGTGATTACATTTGGAGTATTCACCTTGCTTGGAGGGGATCTGACACCTGCAAGAGCTTTTACATCACTTTCTCTGTTTTCTGTGCTTCGATTTCCTCTCTTCATGCTTCCTAATACTATAACTCAGGTGGTTAATGCAAACGTATCGTTGAAGCGACTAGAAGATTTACTCTTAGCAGAAGAGAGAGTACTTCTACCAAATCCACCTATTGAGCCAGGATTACCAGCCATCTCGATCAAGAATGGATACTTTTCTTGGGATGCGAAGGCAGAGAGGGCCTCATTGTCAAACATAAATCTGGATATACCTGTTGGTTGCCTAGTTGCAGTTGTTGGCAGTACAGGAGAAGGGAAGACATCACTAGTATCTGCAATGCTTGGAGAACTTCCACCAATGGCAGATTCATCTGTTGTTTTGAGAGGAACAGTTGCTTATGTACCCCAAGTTTCCTGGATTTTTAATGCAACTGTACGGGATAACATTTTGTTTGGTTCTGTCTTTGACCCAGCAAGATATCAAAGGGCAATAAATGTGACTGAACTGCAGCATGACCTTGAGTTACTGCCGGGTGGTGATCTTACTGAAATTGGTGAAAGAGGGGTAAACATCAGCGGTGGCCAAAAGCAGAGAGTATCCATGGCTAGAGCTGTCTACTCCAATTCTGATGTGTACATCTTTGATGATCCCCTAAGTGCTCTGGATGCGCATGTGGCTAGACAGGTTTTTGATAAATGCATCAAGGGAGATTTGAGAGGGAAGACCCGAGTTCTTGTCACAAATCAGCTGCATTTTCTTTCGCAGGTTAATAGAATCATTTTGGTCCATGAAGGTATGGTGAAGGAGGAGGGAACTTTTGAGGAACTCTCTAACCATGGACCGCTGTTTCAAAAGCTTATGGAAAATGCGGGAAAGATGGAGGAGTATGAAGAAGAAGAAAAGGTAGATACTGAAACCACAGATCAGAAGCCCTCTTCGAAACCAGTGGCCAATGGAGCAATTAATGATCATGCAAAGAGTGGAAGTAAACCAAAAGAAGGAAAATCTGTCCTTATTAAACAAGAAGAACGAGCAACAGGGGTTGTCAGCTTGAATGTTCTAACGAGGTACAAAAGTGCATTAGGAGGGTTTTGGGTGGTTTTCGTACTCTTTGCATGCTATGTCTCAACAGAAACGTTACGAATATCAAGTAGCACATGGTTAAGCCATTGGACTGATCAGAGTGCTACGGAGGGTTACAACCCTGTCTTCTATAATATGATATATGCAGCTCTATCATTTGGACAGGTTTTGGTGACTTTAACAAATTCTTATTGGTTAATCATATCAAGTCTTTATGCTGCTAGAAGGTTGCACGAAGCCATGCTTAGCTCCATATTACGAGCTCCCATGGTGTTTTTCCAAACAAATCCACTCGGAAGAGTTATCAACAGGTTTGCGAAGGATCTAGGTGACATTGATCGTAATGTTGCTCCATTTGTGAATATGTTTCTAGGTCAAGTGTCCCAGCTTCTTTCAACCTTCATCCTCATAGGCATTGTCAGCACAATGTCCTTGTGGGCGATACTGCCATTGTTGGTGTTGTTTTACGTAGCATATCTATACTATCAGAGCACCGCTCGTGAAGTGAAACGCTTAGACTCAATTAGCAGATCTCCTGTTTACGCACAGTTTGGAGAAGCACTGAATGGCTTATCAACGATTCGTGCTTACAAAGCGTATGATCGAATGGCAGATATAAATGGGAAATCCATGGACAACAACATCCGATTCACGCTGGTGAACATGAGTGGAAACCGATGGCTCGCAATCCGATTGGAAACATTGGGAGGCCTTATGATATGGTTGACTGCAACTTTTGCTGTCATGCAGAACGGGAGAGCGGAGAACCAGCAAGAATTCGCATCCACCATGGGGTTACTACTTAGCTATGCTCTGAACATTACTAGTTTGCTTACTGGTGTGCTGAGGCTTGCAAGTTTGGCTGAGAATAGTTTAAATGCAGTTGAACGGATTGGCACTTACATAGATTTGCCCTCGGAGGCTCCCTCTGTCATCGATAATAATCGCCCTCCTCCTGGCTGGCCTTCTTTAGGCTCAATTAGATTTGAAGATGTTGTTCTTCGCTACAGACCTGAGCTTCCTCCTGTGTTGCATGGCTTGTCTTTCACCATTTTCCCGAGTGATAAGGTTGGCATTGTTGGAAGGACTGGTGCAGGAAAATCCAGCATGCTTAATGCTTTGTTTCGAATTGTAGAATTGGAACAAGGAAGAATATTAATTGATGATTATGATGTTGCAAAGTTTGGGCTTGCTGATTTGCGTAAAGTTCTTGGCATTATACCACAATCTCCTGTTCTCTTTTCAGGAACTGTGAGATTTAATCTCGATCCATTCAATGAACACAATGATGCTGACCTCTGGGAGGCTCTGGAGAGGGCACATTTGAAGGATGTGATACGGAGGAATTCTTTGGGGCTGGATGCTGAGGTATCTGAGGCAGGCGAGAACTTCAGTGTTGGGCAAAGGCAACTGTTGAGTCTTTCCCGGGCTTTATTGCGTAGATCGAAAATATTAGTACTTGACGAAGCAACCGCAGCAGTAGATGTTAGAACAGATGCACTCATACAAAAAACAATTCGAGAAGAATTCAAATCCTGTACAATGCTCATTATTGCTCATCGCCTAAACACCATTATTGATTGTGATCGAATTCTTTTGCTTGATGGTGGTAAGGTTCTTGAATACGATACCCCTGAGGAGCTGCTGTCAAATGAAGGTAGTGCTTTCTCTAAGATGGTCCAAAGCACAGGAGCTGCAAATTCCCAGTATTTACGCAGCTTAGCACTTGGTGGGGATAAGTCAGAAAGAGAAGAGAACAAACATCTAGATGCCCGGAGAAAATGGCTGGCTTCTTCTCGATGGGCTGCTGCAGCCCAATTTGCTCTCGCTGTTAGTCTCACCTCATCCCATAATGACCTTCAACGATTGGAAGTGGAAGACGAGAATAGTATTCTGAAGAAGACAAAGGATGCTCTGATAACTTTGCAGGGGGTTCTGGAAAGGAAGCACGATAAAGAAATTGAGGAATCTTTAGAGCAGCGCCAAATATCCCCAGACGGATGGTGGTCATCGCTTTATAAAATGATTGAAGGTCTTGCTATCATGAGCAGATTGACCGTGAACAGGTTCCATCAATCAGACTTCGGTTTTGAGGACAGATCAATTAACTTTGATCAGGTTGATATGTAG | 4354 | 0.4249 | SVLYFYISEVVGQVLFGILLLVYVPTLDPYPGYTPIGTEMITDATYDELPGGDMICPERSANILSRIMFSWMNPIMKLGYERPLTEKDIWKLDTWERTETLINKFQKCWVEESRKSKPWLLRALNASLGGRFWWGGFCKIGNDISQFMGPLILNQLLQSMQNGEPSWTGYVYAFSIFVGVVFGVLCEAQYFQNVMRVGYRLRSTLVAAVFRKSLRLTHEARKQFATGKITNLMTTDAEALQQICQSLHTLWSAPVRIVVAMVLLYQQLGVASLLGALMLVLMFPLQQTFIISRMQKLSKEGLQRTDKRIGLMNEILAAMDTLKYYAWESSFQSKVQIVRDDELSWFRKASLLGACNGFILNSIPVFVTVITFGVFTLLGGDLTPARAFTSLSLFSVLRFPLFMLPNTITQVVNANVSLKRLEDLLLAEERVLLPNPPIEPGLPAISIKNGYFSWDAKAERASLSNINLDIPVGCLVAVVGSTGEGKTSLVSAMLGELPPMADSSVVLRGTVAYVPQVSWIFNATVRDNILFGSVFDPARYQRAINVTELQHDLELLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVARQVFDKCIKGDLRGKTRVLVTNQLHFLSQVNRIILVHEGMVKEEGTFEELSNHGPLFQKLMENAGKMEEYEEEEKVDTETTDQKPSSKPVANGAINDHAKSGSKPKEGKSVLIKQEERATGVVSLNVLTRYKSALGGFWVVFVLFACYVSTETLRISSSTWLSHWTDQSATEGYNPVFYNMIYAALSFGQVLVTLTNSYWLIISSLYAARRLHEAMLSSILRAPMVFFQTNPLGRVINRFAKDLGDIDRNVAPFVNMFLGQVSQLLSTFILIGIVSTMSLWAILPLLVLFYVAYLYYQSTAREVKRLDSISRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDNNIRFTLVNMSGNRWLAIRLETLGGLMIWLTATFAVMQNGRAENQQEFASTMGLLLSYALNITSLLTGVLRLASLAENSLNAVERIGTYIDLPSEAPSVIDNNRPPPGWPSLGSIRFEDVVLRYRPELPPVLHGLSFTIFPSDKVGIVGRTGAGKSSMLNALFRIVELEQGRILIDDYDVAKFGLADLRKVLGIIPQSPVLFSGTVRFNLDPFNEHNDADLWEALERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDGGKVLEYDTPEELLSNEGSAFSKMVQSTGAANSQYLRSLALGGDKSEREENKHLDARRKWLASSRWAAAAQFALAVSLTSSHNDLQRLEVEDENSILKKTKDALITLQGVLERKHDKEIEESLEQRQISPDGWWSSLYKMIEGLAIMSRLTVNRFHQSDFGFEDRSINFDQVDM | 1450 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma15g00873 | 1450 | CDD | ABCC_MRP_domain1 | 445 | 645 | - | - | |
Gma15g00873 | 1450 | SUPERFAMILY | ABC transporter transmembrane region | 118 | 425 | IPR036640 | GO:0005524|GO:0016021 | |
Gma15g00873 | 1450 | Pfam | ABC transporter | 463 | 598 | IPR003439 | GO:0005524 | |
Gma15g00873 | 1450 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 133 | 413 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Gma15g00873 | 1450 | Pfam | ABC transporter | 1085 | 1233 | IPR003439 | GO:0005524 | |
Gma15g00873 | 1450 | MobiDBLite | consensus disorder prediction | 674 | 716 | - | - | |
Gma15g00873 | 1450 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 3 | 1345 | - | - | |
Gma15g00873 | 1450 | SMART | AAA_5 | 1094 | 1287 | IPR003593 | - | |
Gma15g00873 | 1450 | SMART | AAA_5 | 472 | 650 | IPR003593 | - | |
Gma15g00873 | 1450 | Gene3D | ABC transporter type 1, transmembrane domain | 711 | 1049 | IPR036640 | GO:0005524|GO:0016021 | |
Gma15g00873 | 1450 | Gene3D | ABC transporter type 1, transmembrane domain | 105 | 430 | IPR036640 | GO:0005524|GO:0016021 | |
Gma15g00873 | 1450 | CDD | ABCC_MRP_domain2 | 1066 | 1286 | - | - | |
Gma15g00873 | 1450 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 445 | 669 | IPR003439 | GO:0005524 | |
Gma15g00873 | 1450 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 748 | 1031 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Gma15g00873 | 1450 | CDD | ABC_6TM_ABCC_D2 | 747 | 1043 | IPR044726 | GO:0140359 | |
Gma15g00873 | 1450 | ProSitePatterns | ABC transporters family signature. | 571 | 585 | IPR017871 | GO:0005524 | |
Gma15g00873 | 1450 | SUPERFAMILY | ABC transporter transmembrane region | 745 | 1048 | IPR036640 | GO:0005524|GO:0016021 | |
Gma15g00873 | 1450 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 443 | 668 | IPR027417 | - | |
Gma15g00873 | 1450 | MobiDBLite | consensus disorder prediction | 674 | 688 | - | - | |
Gma15g00873 | 1450 | CDD | ABC_6TM_ABCC_D1 | 134 | 421 | IPR044746 | GO:0140359 | |
Gma15g00873 | 1450 | Pfam | ABC transporter transmembrane region | 135 | 401 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Gma15g00873 | 1450 | Pfam | ABC transporter transmembrane region | 748 | 990 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Gma15g00873 | 1450 | PANTHER | ABC TRANSPORTER C FAMILY MEMBER 1 | 3 | 1345 | - | - | |
Gma15g00873 | 1450 | Gene3D | - | 1051 | 1304 | IPR027417 | - | |
Gma15g00873 | 1450 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1068 | 1302 | IPR003439 | GO:0005524 | |
Gma15g00873 | 1450 | Gene3D | - | 440 | 694 | IPR027417 | - | |
Gma15g00873 | 1450 | ProSitePatterns | ABC transporters family signature. | 1205 | 1219 | IPR017871 | GO:0005524 | |
Gma15g00873 | 1450 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1058 | 1299 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma15g00873 | Gma-Chr15 | 7191071 | 7209065 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma15g00873 | 1066 | 1308 | Calmodulin-binding Proteins | AT2G36910 | 30.924 | 2.44e-29 | 125 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma15g00873 | 15 | 7191071 | 7209065 | Gma15g00873 | 15 | 7191071 | 7209065 | ECH | |
Gma15g00873 | 15 | 7191071 | 7209065 | Gma13g01941 | 13 | 34705537 | 34728379 | GST |