Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00873 CTCTGTGCTATACTTTTACATCAGTGAGGTTGTTGGCCAGGTTTTGTTTGGAATACTATTGCTTGTGTATGTTCCTACTTTGGATCCTTATCCAGGTTATACCCCCATTGGGACTGAGATGATTACTGATGCTACATATGATGAACTCCCTGGAGGAGATATGATATGTCCCGAGAGGAGTGCCAACATATTGTCAAGAATAATGTTTTCTTGGATGAATCCCATCATGAAACTAGGATATGAGAGACCACTAACTGAGAAAGATATATGGAAATTAGATACATGGGAACGGACAGAGACACTGATCAATAAGTTCCAGAAATGTTGGGTTGAGGAGTCTCGGAAGTCAAAACCTTGGCTTTTAAGAGCATTAAATGCAAGTCTTGGAGGAAGGTTTTGGTGGGGAGGCTTTTGCAAGATTGGCAATGATATTTCCCAATTTATGGGCCCACTTATATTGAATCAGCTGCTACAGTCTATGCAAAATGGTGAACCATCCTGGACTGGCTATGTTTATGCCTTCTCAATATTTGTTGGAGTGGTCTTTGGGGTGTTATGTGAAGCTCAATATTTTCAGAATGTCATGCGTGTTGGTTACCGGTTAAGATCAACATTGGTGGCTGCTGTATTTCGCAAGTCCCTAAGGCTTACTCATGAAGCACGAAAGCAATTTGCAACTGGAAAAATAACCAACTTAATGACTACTGATGCTGAGGCACTTCAGCAAATATGCCAGTCACTTCACACTCTCTGGTCAGCTCCAGTACGAATTGTTGTTGCTATGGTTCTTCTTTACCAACAACTTGGTGTTGCTTCCCTTCTTGGTGCTTTGATGCTAGTTCTTATGTTCCCATTACAGCAGACATTTATCATTAGCAGAATGCAGAAGTTATCTAAGGAAGGATTACAACGTACAGACAAAAGAATTGGTCTCATGAATGAAATTTTGGCTGCTATGGACACCTTAAAGTATTATGCATGGGAGAGTAGTTTCCAGTCTAAAGTACAGATTGTCCGAGATGATGAATTATCTTGGTTTCGGAAAGCATCATTACTAGGAGCGTGTAATGGATTTATTCTAAATAGCATTCCAGTTTTTGTAACTGTGATTACATTTGGAGTATTCACCTTGCTTGGAGGGGATCTGACACCTGCAAGAGCTTTTACATCACTTTCTCTGTTTTCTGTGCTTCGATTTCCTCTCTTCATGCTTCCTAATACTATAACTCAGGTGGTTAATGCAAACGTATCGTTGAAGCGACTAGAAGATTTACTCTTAGCAGAAGAGAGAGTACTTCTACCAAATCCACCTATTGAGCCAGGATTACCAGCCATCTCGATCAAGAATGGATACTTTTCTTGGGATGCGAAGGCAGAGAGGGCCTCATTGTCAAACATAAATCTGGATATACCTGTTGGTTGCCTAGTTGCAGTTGTTGGCAGTACAGGAGAAGGGAAGACATCACTAGTATCTGCAATGCTTGGAGAACTTCCACCAATGGCAGATTCATCTGTTGTTTTGAGAGGAACAGTTGCTTATGTACCCCAAGTTTCCTGGATTTTTAATGCAACTGTACGGGATAACATTTTGTTTGGTTCTGTCTTTGACCCAGCAAGATATCAAAGGGCAATAAATGTGACTGAACTGCAGCATGACCTTGAGTTACTGCCGGGTGGTGATCTTACTGAAATTGGTGAAAGAGGGGTAAACATCAGCGGTGGCCAAAAGCAGAGAGTATCCATGGCTAGAGCTGTCTACTCCAATTCTGATGTGTACATCTTTGATGATCCCCTAAGTGCTCTGGATGCGCATGTGGCTAGACAGGTTTTTGATAAATGCATCAAGGGAGATTTGAGAGGGAAGACCCGAGTTCTTGTCACAAATCAGCTGCATTTTCTTTCGCAGGTTAATAGAATCATTTTGGTCCATGAAGGTATGGTGAAGGAGGAGGGAACTTTTGAGGAACTCTCTAACCATGGACCGCTGTTTCAAAAGCTTATGGAAAATGCGGGAAAGATGGAGGAGTATGAAGAAGAAGAAAAGGTAGATACTGAAACCACAGATCAGAAGCCCTCTTCGAAACCAGTGGCCAATGGAGCAATTAATGATCATGCAAAGAGTGGAAGTAAACCAAAAGAAGGAAAATCTGTCCTTATTAAACAAGAAGAACGAGCAACAGGGGTTGTCAGCTTGAATGTTCTAACGAGGTACAAAAGTGCATTAGGAGGGTTTTGGGTGGTTTTCGTACTCTTTGCATGCTATGTCTCAACAGAAACGTTACGAATATCAAGTAGCACATGGTTAAGCCATTGGACTGATCAGAGTGCTACGGAGGGTTACAACCCTGTCTTCTATAATATGATATATGCAGCTCTATCATTTGGACAGGTTTTGGTGACTTTAACAAATTCTTATTGGTTAATCATATCAAGTCTTTATGCTGCTAGAAGGTTGCACGAAGCCATGCTTAGCTCCATATTACGAGCTCCCATGGTGTTTTTCCAAACAAATCCACTCGGAAGAGTTATCAACAGGTTTGCGAAGGATCTAGGTGACATTGATCGTAATGTTGCTCCATTTGTGAATATGTTTCTAGGTCAAGTGTCCCAGCTTCTTTCAACCTTCATCCTCATAGGCATTGTCAGCACAATGTCCTTGTGGGCGATACTGCCATTGTTGGTGTTGTTTTACGTAGCATATCTATACTATCAGAGCACCGCTCGTGAAGTGAAACGCTTAGACTCAATTAGCAGATCTCCTGTTTACGCACAGTTTGGAGAAGCACTGAATGGCTTATCAACGATTCGTGCTTACAAAGCGTATGATCGAATGGCAGATATAAATGGGAAATCCATGGACAACAACATCCGATTCACGCTGGTGAACATGAGTGGAAACCGATGGCTCGCAATCCGATTGGAAACATTGGGAGGCCTTATGATATGGTTGACTGCAACTTTTGCTGTCATGCAGAACGGGAGAGCGGAGAACCAGCAAGAATTCGCATCCACCATGGGGTTACTACTTAGCTATGCTCTGAACATTACTAGTTTGCTTACTGGTGTGCTGAGGCTTGCAAGTTTGGCTGAGAATAGTTTAAATGCAGTTGAACGGATTGGCACTTACATAGATTTGCCCTCGGAGGCTCCCTCTGTCATCGATAATAATCGCCCTCCTCCTGGCTGGCCTTCTTTAGGCTCAATTAGATTTGAAGATGTTGTTCTTCGCTACAGACCTGAGCTTCCTCCTGTGTTGCATGGCTTGTCTTTCACCATTTTCCCGAGTGATAAGGTTGGCATTGTTGGAAGGACTGGTGCAGGAAAATCCAGCATGCTTAATGCTTTGTTTCGAATTGTAGAATTGGAACAAGGAAGAATATTAATTGATGATTATGATGTTGCAAAGTTTGGGCTTGCTGATTTGCGTAAAGTTCTTGGCATTATACCACAATCTCCTGTTCTCTTTTCAGGAACTGTGAGATTTAATCTCGATCCATTCAATGAACACAATGATGCTGACCTCTGGGAGGCTCTGGAGAGGGCACATTTGAAGGATGTGATACGGAGGAATTCTTTGGGGCTGGATGCTGAGGTATCTGAGGCAGGCGAGAACTTCAGTGTTGGGCAAAGGCAACTGTTGAGTCTTTCCCGGGCTTTATTGCGTAGATCGAAAATATTAGTACTTGACGAAGCAACCGCAGCAGTAGATGTTAGAACAGATGCACTCATACAAAAAACAATTCGAGAAGAATTCAAATCCTGTACAATGCTCATTATTGCTCATCGCCTAAACACCATTATTGATTGTGATCGAATTCTTTTGCTTGATGGTGGTAAGGTTCTTGAATACGATACCCCTGAGGAGCTGCTGTCAAATGAAGGTAGTGCTTTCTCTAAGATGGTCCAAAGCACAGGAGCTGCAAATTCCCAGTATTTACGCAGCTTAGCACTTGGTGGGGATAAGTCAGAAAGAGAAGAGAACAAACATCTAGATGCCCGGAGAAAATGGCTGGCTTCTTCTCGATGGGCTGCTGCAGCCCAATTTGCTCTCGCTGTTAGTCTCACCTCATCCCATAATGACCTTCAACGATTGGAAGTGGAAGACGAGAATAGTATTCTGAAGAAGACAAAGGATGCTCTGATAACTTTGCAGGGGGTTCTGGAAAGGAAGCACGATAAAGAAATTGAGGAATCTTTAGAGCAGCGCCAAATATCCCCAGACGGATGGTGGTCATCGCTTTATAAAATGATTGAAGGTCTTGCTATCATGAGCAGATTGACCGTGAACAGGTTCCATCAATCAGACTTCGGTTTTGAGGACAGATCAATTAACTTTGATCAGGTTGATATGTAG 4354 0.4249 SVLYFYISEVVGQVLFGILLLVYVPTLDPYPGYTPIGTEMITDATYDELPGGDMICPERSANILSRIMFSWMNPIMKLGYERPLTEKDIWKLDTWERTETLINKFQKCWVEESRKSKPWLLRALNASLGGRFWWGGFCKIGNDISQFMGPLILNQLLQSMQNGEPSWTGYVYAFSIFVGVVFGVLCEAQYFQNVMRVGYRLRSTLVAAVFRKSLRLTHEARKQFATGKITNLMTTDAEALQQICQSLHTLWSAPVRIVVAMVLLYQQLGVASLLGALMLVLMFPLQQTFIISRMQKLSKEGLQRTDKRIGLMNEILAAMDTLKYYAWESSFQSKVQIVRDDELSWFRKASLLGACNGFILNSIPVFVTVITFGVFTLLGGDLTPARAFTSLSLFSVLRFPLFMLPNTITQVVNANVSLKRLEDLLLAEERVLLPNPPIEPGLPAISIKNGYFSWDAKAERASLSNINLDIPVGCLVAVVGSTGEGKTSLVSAMLGELPPMADSSVVLRGTVAYVPQVSWIFNATVRDNILFGSVFDPARYQRAINVTELQHDLELLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVARQVFDKCIKGDLRGKTRVLVTNQLHFLSQVNRIILVHEGMVKEEGTFEELSNHGPLFQKLMENAGKMEEYEEEEKVDTETTDQKPSSKPVANGAINDHAKSGSKPKEGKSVLIKQEERATGVVSLNVLTRYKSALGGFWVVFVLFACYVSTETLRISSSTWLSHWTDQSATEGYNPVFYNMIYAALSFGQVLVTLTNSYWLIISSLYAARRLHEAMLSSILRAPMVFFQTNPLGRVINRFAKDLGDIDRNVAPFVNMFLGQVSQLLSTFILIGIVSTMSLWAILPLLVLFYVAYLYYQSTAREVKRLDSISRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDNNIRFTLVNMSGNRWLAIRLETLGGLMIWLTATFAVMQNGRAENQQEFASTMGLLLSYALNITSLLTGVLRLASLAENSLNAVERIGTYIDLPSEAPSVIDNNRPPPGWPSLGSIRFEDVVLRYRPELPPVLHGLSFTIFPSDKVGIVGRTGAGKSSMLNALFRIVELEQGRILIDDYDVAKFGLADLRKVLGIIPQSPVLFSGTVRFNLDPFNEHNDADLWEALERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDGGKVLEYDTPEELLSNEGSAFSKMVQSTGAANSQYLRSLALGGDKSEREENKHLDARRKWLASSRWAAAAQFALAVSLTSSHNDLQRLEVEDENSILKKTKDALITLQGVLERKHDKEIEESLEQRQISPDGWWSSLYKMIEGLAIMSRLTVNRFHQSDFGFEDRSINFDQVDM 1450
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00873 1450 CDD ABCC_MRP_domain1 445 645 - -
Gma15g00873 1450 SUPERFAMILY ABC transporter transmembrane region 118 425 IPR036640 GO:0005524|GO:0016021
Gma15g00873 1450 Pfam ABC transporter 463 598 IPR003439 GO:0005524
Gma15g00873 1450 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 133 413 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma15g00873 1450 Pfam ABC transporter 1085 1233 IPR003439 GO:0005524
Gma15g00873 1450 MobiDBLite consensus disorder prediction 674 716 - -
Gma15g00873 1450 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 3 1345 - -
Gma15g00873 1450 SMART AAA_5 1094 1287 IPR003593 -
Gma15g00873 1450 SMART AAA_5 472 650 IPR003593 -
Gma15g00873 1450 Gene3D ABC transporter type 1, transmembrane domain 711 1049 IPR036640 GO:0005524|GO:0016021
Gma15g00873 1450 Gene3D ABC transporter type 1, transmembrane domain 105 430 IPR036640 GO:0005524|GO:0016021
Gma15g00873 1450 CDD ABCC_MRP_domain2 1066 1286 - -
Gma15g00873 1450 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 445 669 IPR003439 GO:0005524
Gma15g00873 1450 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 748 1031 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma15g00873 1450 CDD ABC_6TM_ABCC_D2 747 1043 IPR044726 GO:0140359
Gma15g00873 1450 ProSitePatterns ABC transporters family signature. 571 585 IPR017871 GO:0005524
Gma15g00873 1450 SUPERFAMILY ABC transporter transmembrane region 745 1048 IPR036640 GO:0005524|GO:0016021
Gma15g00873 1450 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 443 668 IPR027417 -
Gma15g00873 1450 MobiDBLite consensus disorder prediction 674 688 - -
Gma15g00873 1450 CDD ABC_6TM_ABCC_D1 134 421 IPR044746 GO:0140359
Gma15g00873 1450 Pfam ABC transporter transmembrane region 135 401 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma15g00873 1450 Pfam ABC transporter transmembrane region 748 990 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma15g00873 1450 PANTHER ABC TRANSPORTER C FAMILY MEMBER 1 3 1345 - -
Gma15g00873 1450 Gene3D - 1051 1304 IPR027417 -
Gma15g00873 1450 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1068 1302 IPR003439 GO:0005524
Gma15g00873 1450 Gene3D - 440 694 IPR027417 -
Gma15g00873 1450 ProSitePatterns ABC transporters family signature. 1205 1219 IPR017871 GO:0005524
Gma15g00873 1450 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1058 1299 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma15g00873 Gma-Chr15 7191071 7209065 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00873 1066 1308 Calmodulin-binding Proteins AT2G36910 30.924 2.44e-29 125
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00873 15 7191071 7209065 Gma15g00873 15 7191071 7209065 ECH
Gma15g00873 15 7191071 7209065 Gma13g01941 13 34705537 34728379 GST