Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00857 ATGAGACTTTCTTCAGCTGATTTTAGTCCTCCACCCCAGGAAGGGGAAAAACGAGTTCTAGATTCAGAACTTTGGCATGCATGTGCTGGTCCCCTTGTCTCTTTACCAGCAGTTGGAAGCCGCGTGGTGTACTTTCCACAAGGTCACAGTGAACAAGTGGCTGTGTCAACCAACAAGGAAGTAGATGCTCATATCCCAAACTATCCAAGCTTGCCTCCTCAACTCATTTGTCAACTTCATAATATGACTATGCACGCTGATGTTGAGACTGATGAAGTGTACGCTCAGATGACCTTGCAACCTCTGAATCCTCAAGAGCAAAATGAGGCATACCTTCCAGCAGAGTTGGGCACTGCAAGCAAACAGCCAACAAACTATTTCTGCAAAACTTTGACCGCCAGTGACACAAGCACTCATGGGGGATTCTCTGTGCCTCGCCGGGCAGCTGAAAAAGTGTTTCCTCCATTGGATTTCTCTCAACAGCCTCCTGCTCAAGAATTAATTGCAAGGGATTTGCATGGTAATGAATGGAAATTCAGACATATCTTCCGGGgccagcccaaaaggcatctacttacaaccggatggagtgtctttgtgagtgctaaaagacttgtTGCTGGTGATTCTGTGCTGTTTATCTGGCAAGTAACTTTATTGAATGAAAAGAACCAACTGCTTCTTGGCATTCGCCGCGCTAATCGACCACAAACTGTGATGCCTTCTTCAGTGTTGTCAAGTGATAGTATGCACTTGGGGCTTCTTGCTGCAGCAGCTCATGCAGCTGCAACAAATAGTCGTTTCACCATTTTCTATAACCCACGTGCTAGCCCTTCAGAATTTGTCATACCCTTGGCGAAGTATGTTAAAGCTGTGTATCATACTCGAGTTTCAGTTGGCATGCGGTTCAGGATGCTGTTTGAAACAGAGGAGTCAAGTGTGCGGCGATACATGGGTACAATAACTGGCATTGGTGACCTGGATCCTGTCCGGTGGCCAAACTCACATTGGCGCTCAGTCAAGGTTGGCTGGGATGAATCCACTGCTGGAGAGAGGCAACCTAGAGTGTCTCTATGGGAAATTGAGCCGTTAACTACATTTCCTATGTATCCATCTTCATTCCCCCTTAGGCTTAAACGACCATGGCCTCCAGGACTGCCTTCATTCCATGGCATGAAGGATGATGATTTTGGCCTGAATTCACCTCTGTTGTGGCTCCGAGACACCGATAGGGGGCTTCAGTCTCTTAATTTTCAGGGGATTGGGGTTAATCCTTGGATGCAGCCAAGATTTGATCCCACCGTGTTGAATATGCAAACAGATATGTATCAAGCTGCTGCTGCTGCTGCTGTTCAGGACATGAGGAGTTTAGATCCTTCCAAACAGCTTTCTGCTTCCTTACTTCAATTTCAGCAACCACAGAACTTCCCAAACAGGACTGCTGCTTTAATGCAGGCCCAGATGTTGCAGAAGTCGCAACCTCAGCAGATTTTTGGAAATAATCAAGAGAATCAGCATTCACCACAATCTCAGCCACAGACTCAGGCTCATCttcagcaacatctacaacatcaacactcattcaatagtcagcatcatcatcaccagcagcaacaacagcaacagcaAGTAGTTGATAATCAGCAGATTTCTAGTGCAGTCTCTACAATGTCTCAGTTGTTTTCAGCTCCTCAACCTCAATCACCACCTATGCAAGCTATCTCTTCCCTGTGCCAAAATTTTTCCAATTCAAATGGGAACTCTGTGACTACTATTGTTTCCCCCCTGCACAGTATCTTGGGTTCTTTTCCCCAGGATGAAACATCTCACCTCCTGAACCTTCCTAGAACAAGCTCTTGGATTCCTATTCAAAATTCAAGTGGGTGGCCCTCGAAGCGTGTTGCAGTGGATCCTCTCCTTTCTTCCGGAGCCTCCCATTGTGTTCTACCTCAGGTGGATCAGCTAGGGCAACCACATAGTACCATGTCTCTAAATGCTATTACATTACCACCTTTTCCTGGTAGGGAGAGCTCAATAGACCAAGAAGGGAGCAATGATCCACAAAACCATCTCTTGTTTGGTGTTAATATAGACCCCTCGTCCCTTCTCATGCCTAATGGGATGTCAAGCCTTAAGGGGGTTAGCGGAAATAATAACTCCTCAACCTTGCCATATCAATCTTCTAATTATCTGAATACTACCACAGGCACTGATTCTTCATTGAATCATGGAATGACACCCAACATAGGCGACTCGGGTTTCCTGCATTGTCCGGAAGATGCAGGACAAGGAAACCCACTGAACAAAACCTTTGTGAAGGTTTATAAGTCAGGGTCCTTTGGAAGGTCATTGGATATCACCAAATTCAGCAGCTACCATGAGCTGCGTGGTGAACTCGCTCGAATGTTTGGCCTTGAAGGCGAGTTGGAGGACCCTGTGAGATCAGGCTGGCAGCTTGTATTTGTAGACCGAGAGAATGATGTTCTTCTCCTTGGTGATGGCCCCTGGCCGGAATTCGTAAATAGTGTATGGTGCATAAAGATACTTTCTCCTCAGGAAGTGCAGCAAATGGGCAACAATGGCCTTGAGCTGTTGAACTCGGTTCCAAATCAAAGGCTCTCTAATGGCATCTGTGATGACTATGTGAGCCGTCAAGACCCAAGAAATTTAAGCACTGGGATAACAACTGTGGGGTCTTTAGACTACTAA 2709 0.4385 MRLSSADFSPPPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQLICQLHNMTMHADVETDEVYAQMTLQPLNPQEQNEAYLPAELGTASKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWQVTLLNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGIGDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSSFPLRLKRPWPPGLPSFHGMKDDDFGLNSPLLWLRDTDRGLQSLNFQGIGVNPWMQPRFDPTVLNMQTDMYQAAAAAAVQDMRSLDPSKQLSASLLQFQQPQNFPNRTAALMQAQMLQKSQPQQIFGNNQENQHSPQSQPQTQAHLQQHLQHQHSFNSQHHHHQQQQQQQQVVDNQQISSAVSTMSQLFSAPQPQSPPMQAISSLCQNFSNSNGNSVTTIVSPLHSILGSFPQDETSHLLNLPRTSSWIPIQNSSGWPSKRVAVDPLLSSGASHCVLPQVDQLGQPHSTMSLNAITLPPFPGRESSIDQEGSNDPQNHLLFGVNIDPSSLLMPNGMSSLKGVSGNNNSSTLPYQSSNYLNTTTGTDSSLNHGMTPNIGDSGFLHCPEDAGQGNPLNKTFVKVYKSGSFGRSLDITKFSSYHELRGELARMFGLEGELEDPVRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQMGNNGLELLNSVPNQRLSNGICDDYVSRQDPRNLSTGITTVGSLDY 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00857 902 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 882 IPR044835 GO:0003677|GO:0006355|GO:0009725
Gma15g00857 902 Pfam AUX/IAA family 766 854 IPR033389 -
Gma15g00857 902 SMART B3_2 127 234 IPR003340 GO:0003677
Gma15g00857 902 Gene3D - 296 368 - -
Gma15g00857 902 Gene3D - 125 233 IPR015300 -
Gma15g00857 902 MobiDBLite consensus disorder prediction 499 549 - -
Gma15g00857 902 Pfam Auxin response factor 258 341 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Gma15g00857 902 PANTHER AUXIN RESPONSE FACTOR 1 882 - -
Gma15g00857 902 Gene3D - 766 858 - -
Gma15g00857 902 CDD B3_DNA 126 232 IPR003340 GO:0003677
Gma15g00857 902 ProSiteProfiles B3 DNA-binding domain profile. 127 234 IPR003340 GO:0003677
Gma15g00857 902 SUPERFAMILY DNA-binding pseudobarrel domain 112 261 IPR015300 -
Gma15g00857 902 Pfam B3 DNA binding domain 127 233 IPR003340 GO:0003677
Gma15g00857 902 ProSiteProfiles PB1 domain profile. 769 853 IPR000270 GO:0005515
Gma15g00857 902 SUPERFAMILY CAD & PB1 domains 769 844 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00857 Gma-Chr15 7050010 7055953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00857 1 488 B3 DNA Binding Superfamily AT1G30330 85.396 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Gma15g00857 AUX_IAA 2e-06 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00857 - - gmx:100796447 1705.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00857 15 7050010 7055953 Gma15g00857 15 7050010 7055953 ECH