Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00856 ATGCCTAAGCAAATCCACGAGATTAAGGATTTCCTTCTCACTGCTAGAAGGAAGGACGCAAGGTCGGTGAAGATCAAGAGGAGCAGAGATGTGGTTAAGTTCAAGGTCAGATGCTCGAAGTACCTCTACACACTTTGTGTGTTTGACCCAGAGAAAGCTGATAAATTGAAGCAATCTCTTCCTCCAGGTTTGAGTGTTCAAGACCTAGGCGGTGCATTAGTGTTTTCCCATCTAAAATTTGACTATGGTCGTCAATTGCCATTTAACTGCGAGATCTTTGCTTTTGCTGGGCAGTGGCACATATCAAGGCCGGAAGAAGTATCTGAGGCAAGCAAACTGTTCTTCACAAATTCGGCTTCCTTGAGCCTTGAAGGTGAAGTTCTGGTTGAGTTACAGTTGGATCCATCCTTCTTCCTATGA 420 0.4452 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCVFDPEKADKLKQSLPPGLSVQDLGGALVFSHLKFDYGRQLPFNCEIFAFAGQWHISRPEEVSEASKLFFTNSASLSLEGEVLVELQLDPSFFL 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00856 139 Gene3D - 1 69 IPR038464 -
Gma15g00856 139 PANTHER 60S RIBOSOMAL PROTEIN L38 1 69 - -
Gma15g00856 139 PANTHER 60S RIBOSOMAL PROTEIN L38 1 69 IPR002675 GO:0003735|GO:0005840|GO:0006412
Gma15g00856 139 Pfam Ribosomal L38e protein family 2 68 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00856 Gma-Chr15 7039930 7042583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00856 1 69 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 94.203 4.80e-43 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00856 K02923 - gmx:100305707 140.584