Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00851 ATGGCACACAACACAGAGGTGCCACCTTCTACGTCTTCACAACCTCATGAAAGAGACAAAGCCAACCAAAAAGTTCCCTTCTACAAGCTCTTCACTTTAGCTGATCGTCTTGACGTGGCATTGATTACCATTGGCACGATCGGTGCCATGGCTAATGGGTGCTCGCAGCCTCTCATGACACTCATTCTAGGCAAAATTATCAACACCTTTGGCTCCGCCGATCCATCAAATACTATCAAGGAAGTTTCTAACGTTGCGTTATTATTTGTTTACCTGGCTATTGCAACTGGAATTGCGTCGTTTCTTCAGGTAGCATGTTGGATGGTGACAGGAGAAAGACAAGCCGCAAGGATCCGTGGATTGTACTTGAAAACTATATTGAAGCAAGACATTGCTTTCTTTGACACTGAAACAACAACTGGAGAGGTTATTGGGAGAATGTCTGGTGACACCATTCTCATTCAAGATGCCATGGGAGAAAAGGTTGGGAAGTTTATACAACTCGCTTCGACTTTTATTGGTGGCTTTGTGATTGGCTTTGTAAGAGGATGGCGTCTCGCTCTTGTTTTGCTCGCATGCATACCATGTGTTGTTTTAATTGGTGGAGCTTTGTCCATGGTGATGACTAAAATGGCCAGTCGTGGGCAAGCTGCTTATGCAGAAGCAGGAAATGTGGTTGAGCAAACAGTGGGAGCTATTAGAACAGTGGCATCTTTCACTGGCGAGAAAAAAGCAATAGAAAAGTATAACACCAAGTTAAATGTTGCTTATAAAACAATGATTCAACAAGGTTTGGCCTCGGGGTTAGGAATGGGAGCACTTCTGCTGACTATCTTCTGCACCTATGCACTTGCCATGTGGTATGGTTCTAAACTGGTCATTGAGAAAGGATACAATGGTGGAACCGTCATCACTGTAATAGTAGCTCTTATGACTGGTGGAATGTCACTTGGTCAAACATCTCCAAGCCTAAATGCATTCGCAGCAGGCCAAGCAGCAGCTTATAAGATGTTTGAGACAATTGCACGAAAGCCAAAAATTGATGCTTATGACACCAATGGTGTTGTCTTGGAAGACATAAAGGGAGATATTGAACTCAAGAATGTTCACTTCAGATATCCTGCAAGGCCTGATGTTCAGATCTTTTCCGGATTCTCATTGTATGTTCCAAGTGGCACAACTGCTGCTTTAGTGGGCCAAAGTGGAAGCGGAAAGTCTACTGTGATCAGTTTATTGGAAAGATTCTATGATCCTGATGCTGGAGAAGTACTCATAGATGGTGTGAATTTGAAGAATTTTCAAGTTAGATGGATAAGAGAACAAATTGGGCTCGTTAGTCAAGAACCTGTCCTGTTTGCAACTAGTATCAGAGAAAACATAGCCTATGGAAAAGAAGGTGCAACTAATGAGGAGGTTACAACGGCAATAAAACTTGCCAATGCTAAAAAGTTCATTGACAAGCTGCCTCAGGGCCTTGAGACAATGGCAGGCCAGAATGGGACTCAACTTTCTGGTGGGCAAAAGCAAAGAATTGCAATTGCAAGGGCAATTTTGAAGAACCCAAGAATCCTTCTTCTTGATGAAGCAACAAGTGCATTGGATGCTGAGTCTGAACATGTTGTCCAAGCAGCATTAGAACAAGCTATGTCAAAAAGAACTACTGTAGTTGTTGCACATCGCTTGACAACTATTAGAAATGCTGACACCATAGCAGTGGTTCATGAAGGCAGAATTGTAGAGCAAGGAACTCATGATGAGTTAATCAAGGATGTTGATGGTGCTTATTTTCAGCTTATTCGTCTACAAAAAGGAGCTAAGGAAGCTGAAGGTAGCCATAATTCTGAAGCAGAGAGGTCAAGTAGCAGTTTTAATTTAGATATTCACATGGCTAGATCTTCCACCCAGAGAGCAGTTTCAATAAGCAGAGGTTCATCAGGTAGACACTCCCAGTCACATAGCTTTTCTCTTTCTCATCAAAGTGGGGTACATGAATCTGGAGAAAGAGCCGGCGGGGATGCTGAGAAGCCCAGAAAGGTTTCTTTAAGACGTTTGGCCTACTTAAACAAGCCTGAAGTTCTTGTCTTAGTGCTTGGGTCCATTGCTGCAATAGTTCAAGGTGTTGTGTTCCCTATGTTTGGCTTCTTGTTTTCCTCAGCAATAGCTATGTTCTATGAACCTCCAGAAAAACAGCGGAAAGATTCTAGTTTCTGGGCACTTCTATATGTGGGTTTGGGTATAGTTACTCTAGTGATTATACCAGTGCAAAATTACTTCTTTGGCATTGCTGGTGGAAAATTAATAGAAAGAATTCGTTTACTGACATTTAAAAAGGTTGTGCACCAAGAAATCAGTTGGTTTGATGATCCTGCAAATTCAAGTGGTGCAGTTGGTGCAAGGTTATCTACAGATGCTTCAACAGTGAAAAGTCTAGTGGGTGACACATTGGCTCTCATTGTGCAAAACATATCAACAATCACAGCAGGTCTAGTTATATCATTCACTGCTAATTGGATTCTTGCTTTAATAATTGTAGCTGTGTCACCCTTGATCTTTATACAAGGAGTTCTTCAGATGAAGTTTCTTAAAGGATTTAGTGGAGATGCCAAGGCAAAGTATGAAGAGGCAAGTCAAGTGGCAAATGATGCTGTTGGTAGCATCAGAACCATTGCATCATTCTGTGCCGAATCAAAGGTGATGGATATGTACAGGAAGAAATGTTTAGAGCCGGAAAAACAAGGTGTTAGGTTGGGGCTTGTGAGTGGTACAGGATTTGGCTTCTCTTTTCTGGCTCTATACTGCACAAATGCTTTCTGTTTCTACATAGGATCTGTTCTTGTGCAACATGGGAAAGCAACTTTTCCAGAGGTTTTCAAGGTCTTCTTTTGTTTAACAATCACAGCCATAGGCATTTCCCAGACTAGTGTCTTAGCACCAGACACTAACAAGGCCAAAGATTCCGCAGCTTCAATATTTAAAATTCTTGACAGTAAACCTACCATTGACTCCAGCAGCAATGAGGGTAGAACACTAGAAGCCGTTTCTGGTGATATTGAACTTCAACATGTCAGTTTTAATTACCCAACTAGGCCTCATATTCAAATTTTCAAAGATTTGTGTCTAAGCATTCCAGCTGGAAAGACTGTTGCATTGGTTGGAGAAAGTGGCAGTGGAAAATCAACAGTGATCAGCCTCTTGGAGAGATTTTACAACCCTGATTCTGGACATATACTACTAGATGGAGTGGATATAAAAGAGTTCAGACTAAGCTGGTTGAGGCAGCAAATGGGTTTGGTTGGTCAAGAGCCTATTCTTTTCAATGAAAGCATCCGGGCCAACATAGCTTATGGCAAAGAGGGAGGTGCCACAGAGGCAGAGATAATTGCAGCAGCTGAAGCAGCCAATGCACAGGAGTTTATAAGTTCTCTTCCAAATGGTTATGACACCAATGTTGGAGAAAGAGGCACACAATTGTCAGGAGGACAAAAGCAGCGCATAGCCATTGCAAGAGCCATGCTGAAAGACCCCAAAATCCTTCTGCTGGATGAGGCAACTAGTGCACTTGATGCCGAGTCGGAGCGTGTAGTTGAAGAGGCTCTAGATAAAGTTAGCGTGGACAGAACAACTGTAGTGGTAGCTCACCGGCTTACAACAATTAGAGATGCTGACCTCATAGCAGTAATGAAAAATGGGGCAGTTGCTGAAAGGGGAAGACATGATGCATTGATGAAGATTACTGATGGAGTATATGCATCATTGGTAGCTCTACATATGAGTGCAGCTTAA 3783 0.4235 MAHNTEVPPSTSSQPHERDKANQKVPFYKLFTLADRLDVALITIGTIGAMANGCSQPLMTLILGKIINTFGSADPSNTIKEVSNVALLFVYLAIATGIASFLQVACWMVTGERQAARIRGLYLKTILKQDIAFFDTETTTGEVIGRMSGDTILIQDAMGEKVGKFIQLASTFIGGFVIGFVRGWRLALVLLACIPCVVLIGGALSMVMTKMASRGQAAYAEAGNVVEQTVGAIRTVASFTGEKKAIEKYNTKLNVAYKTMIQQGLASGLGMGALLLTIFCTYALAMWYGSKLVIEKGYNGGTVITVIVALMTGGMSLGQTSPSLNAFAAGQAAAYKMFETIARKPKIDAYDTNGVVLEDIKGDIELKNVHFRYPARPDVQIFSGFSLYVPSGTTAALVGQSGSGKSTVISLLERFYDPDAGEVLIDGVNLKNFQVRWIREQIGLVSQEPVLFATSIRENIAYGKEGATNEEVTTAIKLANAKKFIDKLPQGLETMAGQNGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESEHVVQAALEQAMSKRTTVVVAHRLTTIRNADTIAVVHEGRIVEQGTHDELIKDVDGAYFQLIRLQKGAKEAEGSHNSEAERSSSSFNLDIHMARSSTQRAVSISRGSSGRHSQSHSFSLSHQSGVHESGERAGGDAEKPRKVSLRRLAYLNKPEVLVLVLGSIAAIVQGVVFPMFGFLFSSAIAMFYEPPEKQRKDSSFWALLYVGLGIVTLVIIPVQNYFFGIAGGKLIERIRLLTFKKVVHQEISWFDDPANSSGAVGARLSTDASTVKSLVGDTLALIVQNISTITAGLVISFTANWILALIIVAVSPLIFIQGVLQMKFLKGFSGDAKAKYEEASQVANDAVGSIRTIASFCAESKVMDMYRKKCLEPEKQGVRLGLVSGTGFGFSFLALYCTNAFCFYIGSVLVQHGKATFPEVFKVFFCLTITAIGISQTSVLAPDTNKAKDSAASIFKILDSKPTIDSSSNEGRTLEAVSGDIELQHVSFNYPTRPHIQIFKDLCLSIPAGKTVALVGESGSGKSTVISLLERFYNPDSGHILLDGVDIKEFRLSWLRQQMGLVGQEPILFNESIRANIAYGKEGGATEAEIIAAAEAANAQEFISSLPNGYDTNVGERGTQLSGGQKQRIAIARAMLKDPKILLLDEATSALDAESERVVEEALDKVSVDRTTVVVAHRLTTIRDADLIAVMKNGAVAERGRHDALMKITDGVYASLVALHMSAA 1260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00851 1260 CDD ABC_MTABC3_MDL1_MDL2 1017 1253 - -
Gma15g00851 1260 MobiDBLite consensus disorder prediction 636 675 - -
Gma15g00851 1260 ProSitePatterns ABC transporters family signature. 1157 1171 IPR017871 GO:0005524
Gma15g00851 1260 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1007 1255 IPR027417 -
Gma15g00851 1260 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 19 1257 IPR039421 -
Gma15g00851 1260 SUPERFAMILY ABC transporter transmembrane region 29 348 IPR036640 GO:0005524|GO:0016021
Gma15g00851 1260 Gene3D - 1007 1259 IPR027417 -
Gma15g00851 1260 Pfam ABC transporter 1036 1185 IPR003439 GO:0005524
Gma15g00851 1260 Pfam ABC transporter 384 531 IPR003439 GO:0005524
Gma15g00851 1260 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 364 600 IPR003439 GO:0005524
Gma15g00851 1260 SMART AAA_5 1044 1231 IPR003593 -
Gma15g00851 1260 SMART AAA_5 391 577 IPR003593 -
Gma15g00851 1260 ProSitePatterns ABC transporters family signature. 503 517 IPR017871 GO:0005524
Gma15g00851 1260 CDD ABC_6TM_Pgp_ABCB1_D1_like 42 325 - -
Gma15g00851 1260 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 44 329 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma15g00851 1260 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 19 1257 - -
Gma15g00851 1260 Gene3D ABC transporter type 1, transmembrane domain 87 991 IPR036640 GO:0005524|GO:0016021
Gma15g00851 1260 Pfam ABC transporter transmembrane region 696 967 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma15g00851 1260 Pfam ABC transporter transmembrane region 43 313 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma15g00851 1260 MobiDBLite consensus disorder prediction 1 20 - -
Gma15g00851 1260 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 353 602 IPR027417 -
Gma15g00851 1260 Gene3D - 362 615 IPR027417 -
Gma15g00851 1260 MobiDBLite consensus disorder prediction 1 16 - -
Gma15g00851 1260 MobiDBLite consensus disorder prediction 636 662 - -
Gma15g00851 1260 CDD ABC_6TM_Pgp_ABCB1_D2_like 685 1000 - -
Gma15g00851 1260 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1017 1254 IPR003439 GO:0005524
Gma15g00851 1260 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 696 982 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma15g00851 1260 CDD ABC_MTABC3_MDL1_MDL2 364 602 - -
Gma15g00851 1260 SUPERFAMILY ABC transporter transmembrane region 676 998 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00851 Gma-Chr15 7005609 7010962 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00851 8 1256 Calmodulin-binding Proteins AT2G36910 45.274 0.0 1079
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00851 K05658 - gmx:100801771 2345.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00851 15 7005609 7010962 Gma15g00851 15 7005609 7010962 ECH