Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00829 atggtgctgtttaagatgaaggaAGTTGTCGAAGCCCATTTGGGTCATTTCGTAAAGGATGCAGTGATCACTGTCCCTGCTTACTTCAGCAACGCGCAGAGACAGGCCACTAAGGATGTCGGGAAAATCGCGGGTTTGAACGTGTTGAGGATCATCAGCGAACCAACTGCGGCTGCTATTGCTTACGGGTTGGACAGAAAAGGATTGAGAGTGGGTGAGCAGAACGTGCTTGTGTTTGATCTCGGTGGTGGTACTTTTGATGTTTCCTTGGTGACTATTTATGAAGGGATGTTTAAGGTTAAGGCTAGTGTGGGAGATACTCATTTGGGTGGTGTGGATTTTGATAACAAATTGGTGAACCATCTGGTGAATGTGTTTAGAGAGAAGCACAAGAAGGATATTAGCGGGAATGCGGAAGCTTTGGTGAGGTTGAGGTCAGCGTGCGAGAAAGCAAAGAGGATTCTGTCTTCGACTGCTCAGACAACGATTGAGCTTGATTGTTTATATGAAGGGGTTGATCTGTATGCCACTGTGACAAGGGCCTTGTTCGAGGAACTGAACAAGGACTTGTTTATGAAGTGTATGGAGACGGTGGAGAAGTGTCTCCTTGAGGCAAGGAGTGATAAGATTCAAGTCCATGAGATCGTTCTTGTTGGTGGGTCTACTAGAATTCCAAAGGTACAACAACTTCTGAAGGACATGTTCAGTCTCAATGGTACCACCAAAGAGCTTTGCAAAGGCATCAACCCTGATGAAGCTGTGGCGTATGGTGCAGCAGTTCAAGCAGCGATTTTGAGCGGTGAAGGAGATAAAAAAGTGGAGGAATTGTTGTTGCTGGATGTGATGCCAATTAGTATTGGATTCGAGGGTGCTGGTGGTGTGATGTCAGTGTTGATCCCCAAGAACACCGCGATCCCCACCAAGAAGGAGAGGGTTTGTTCCATCTTCTACGACAATCAGAAATCTCTTACAGTCAAAGTGTTCGAGGGAGAACAAGTTAAGACAAAGGATAACTTCTTTCTCGGCAAGTTTATCCTCTACAGGTTCGATCCATTACCAAAGGGAGTGTCACAAATCAGCGTTATCTTTGATGTGGATGCTGATGGCATTGTGGAGGTAACCGCGGAAGATCAAGCCAAAGGGTTAAAAAAGAAGATCACAATCAATAGCAAGCATGGAAGGCTAAGCCCGGAAGAGATAAGAAGAATGGTGAGAGATTCAAAGAGGTACAAGGCAGAGGATGAGGTGGCAAAGAAGAAGGTGAAGGCGAAGAACACACTCGAGAATTACGCTTATGAAATGAGGGAGAGAGCAAAGAAGATTGAAGAGGCAGTTGAGGAAACCATAGAGTGGCTAGAGTGTAACCAATTGGCAGAGATAGAGGAGTTTGATTGCAAGAAGCAAGAGCTAGGAAGGTACCTAAGAGATGATCCAAATTATAGTAACACCTCAAATTCTGGAGTTAAGGTTCCTATATGGTGTACATGGAGATGTCCACCTAATGGGTGGGTTTGCCTGAACACAGATGGTTCTGTGTTTGAGAACCATAGAAACGGGAGTACTGGGAGTGCGTGTGGTGGTCTAGTTCGTGATTCCTCAGGATGTTTCCTAGGTGGTTTCACTGTTAATTTAGATTCTGGTCATGCTCTTGGTCTTATAAGGCATGACCCAGTGGCTAAAGACCTAGCTTTTGCGTTGGTTTCGGAGATCAACGAGCTTGTTCGCAAAGAGTGGTTGGTGGAGTTCTCGCACGTGTTTAGAGAGTCCAATCGTGCGGCTGATAAGTTGGCTCACTTGGGACACTCCCACTCTTCGGAATCGGGTGCGAAGCGATTCTCGGACCCACCCTTTGCCCTTCTTGCTATTCTTCAAGATGACTTGGCAGGGGTTGCAAAGCAATGTGGCGTTCCCTAG 1914 0.4566 MVLFKMKEVVEAHLGHFVKDAVITVPAYFSNAQRQATKDVGKIAGLNVLRIISEPTAAAIAYGLDRKGLRVGEQNVLVFDLGGGTFDVSLVTIYEGMFKVKASVGDTHLGGVDFDNKLVNHLVNVFREKHKKDISGNAEALVRLRSACEKAKRILSSTAQTTIELDCLYEGVDLYATVTRALFEELNKDLFMKCMETVEKCLLEARSDKIQVHEIVLVGGSTRIPKVQQLLKDMFSLNGTTKELCKGINPDEAVAYGAAVQAAILSGEGDKKVEELLLLDVMPISIGFEGAGGVMSVLIPKNTAIPTKKERVCSIFYDNQKSLTVKVFEGEQVKTKDNFFLGKFILYRFDPLPKGVSQISVIFDVDADGIVEVTAEDQAKGLKKKITINSKHGRLSPEEIRRMVRDSKRYKAEDEVAKKKVKAKNTLENYAYEMRERAKKIEEAVEETIEWLECNQLAEIEEFDCKKQELGRYLRDDPNYSNTSNSGVKVPIWCTWRCPPNGWVCLNTDGSVFENHRNGSTGSACGGLVRDSSGCFLGGFTVNLDSGHALGLIRHDPVAKDLAFALVSEINELVRKEWLVEFSHVFRESNRAADKLAHLGHSHSSESGAKRFSDPPFALLAILQDDLAGVAKQCGVP 637
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00829 637 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 270 424 IPR029047 -
Gma15g00829 637 SUPERFAMILY Actin-like ATPase domain 1 66 IPR043129 -
Gma15g00829 637 Pfam Hsp70 protein 1 470 IPR013126 GO:0005524|GO:0140662
Gma15g00829 637 PANTHER HEAT SHOCK PROTEIN 70KDA 1 471 IPR013126 GO:0005524|GO:0140662
Gma15g00829 637 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 272 428 IPR029047 -
Gma15g00829 637 Gene3D - 2 262 - -
Gma15g00829 637 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 1 471 - -
Gma15g00829 637 CDD RNase_H_like 506 598 IPR044730 -
Gma15g00829 637 ProSitePatterns Heat shock hsp70 proteins family signature 3. 215 229 IPR018181 -
Gma15g00829 637 Gene3D - 425 476 IPR029048 -
Gma15g00829 637 SUPERFAMILY Actin-like ATPase domain 72 267 IPR043129 -
Gma15g00829 637 Gene3D - 67 245 - -
Gma15g00829 637 Gene3D Actin; Chain A, domain 4 110 193 - -
Gma15g00829 637 ProSitePatterns Heat shock hsp70 proteins family signature 2. 78 91 IPR018181 -
Gma15g00829 637 PRINTS 70kDa heat shock protein signature 356 372 - -
Gma15g00829 637 PRINTS 70kDa heat shock protein signature 84 94 - -
Gma15g00829 637 PRINTS 70kDa heat shock protein signature 248 268 - -
Gma15g00829 637 PRINTS 70kDa heat shock protein signature 21 41 - -
Gma15g00829 637 PRINTS 70kDa heat shock protein signature 275 294 - -
Gma15g00829 637 Pfam Reverse transcriptase-like 557 598 IPR002156 GO:0003676|GO:0004523
Gma15g00829 637 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 423 472 IPR029048 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma15g00829 Gma-Chr15 6816654 6818661 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00829 1 470 Calmodulin-binding Proteins AT1G16030 65.496 0.0 645
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00829 K03283 - gmx:100795699 1124.38
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00829 15 6816654 6818661 Gma13g01980 13 35090916 35093688 GST