Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00805 ATGGGAGCAGTGAGTGATGGAAACCGCAGCAGAAAGAAGTCATCATCAAGAGGGCACCACAGGTTTGTAGGGGTTCGACAAAGGCCATCAGGGAGATGGGTGGCAGAGATCAAAGACTCTCTACAAAAGGTTAGGCTTTGGCTTGGAACATTTGACACTGCTGAGGATGCAGCTCGAGCATATGACAATGCTGCTCGAGCCTTGAGAGGTGCCAATGCTAGAACCAACTTTGAATTGCCTGAGTCTTCTTCTGGTGGTGCTACTAAGCGTGGTGGTTCTAAGTTTGTGCCTGATTGCACTGAACCCTTTTCTTTTGAGGATGTGAATGAGCCAGGTTCAGAAGCTGAAGGCCTTCTTGGTGCACTTAAGGCCAAGCTGCTTGATGGAAAGAAAGGGAAGTTTCAGTTTCAATTTCTTGGTAATTGTTCTGCCCCGGTTGTTCAATCTGGCATGGTTTCAAGATCAACTCAGAACTGTTCTGGGAAGAAAGAATTGCTATTACCATCATCAGCTAATAATACTGTTCTTTCAAGGATGAATGGAACTGGAACTTGCAGCCCTGTGCATGGTTTAATGAGTACTTTAGCTTCATCAAACACTTGTGCTAAGACTGTGGTTATCCCAAATCATGATCATGAATTAGTTGCTGTAGCAAGCACAAGCAGTGGTAGAGTCTACTCTCATCAACTTTGTCAAACCCCACCTGTGACAACATGGCCCAATGAAGTGGCATATGATTTGCCTTGGCCTACACAATATATGAGTCAAGTTCCTGATAATAGCCTTCTTGCATCTTCCGGTGCTGTAGCCACCTTGTCTACATGGCCACTTTCTGGGGTAACTGAGTCTACTGTTGATATGACATACATGGATCAGGGACAATCAAATAGCAACAAAAGTGGCCAAATGATGAATATGGTGAGCATGCAATTGCCTCTAGTTGGTGGTGCAAATGAAGGCCTTTGGACATTGGAGCAGCAACAATTTGTGCAATGTGATCAGAACAACAGCTGGTTTAGTTTTAATGGCTCTTGGGATCCTCTCCTCTATCTGTGGAATAGAATTGCATTGCTGAAAATGAGGAGTACTTGTGATGAATGGAAACCTTTTATAGTAATGATAGCAATTGATTTTTCTTTTGCGGCAGTGAATATCCTTCTCAAGAAAGTCCTGGAAGAGGGAATGAACCATTTGGTTTTTATCACATACCGGCTGTCAATTGCTACCATTTTCATAGCCCCAATCGGCTACTTTAGGGAAAGAAACGACAGGCCAAGGCTCACATTTCGAATTTTATGTTACCTCTTCTGCAGTGCCATTGTTGGGGCATCAGTGACTCAATACTTTTTCCTTCTGGGGATCCAATATACTTCTGCTACCTTTTCTTGTGCTTTCATCAACATGGTGCCTGTGGTCACATTCATGATGGCATTACCATTTGGATTAGAGACCGTGAAAATCAAGAGCAAAAGTGGCAGAGCTAAGATTCTTGGTTCATTGGTGTGCATAGGCGGCGCATTGATGTTGACACTTTACAAAGGCAAGCCACTGTTTAATTTTTCTCACTATGAATCTGTATCTCCTGTGGCCAAGAGTTCTGAAGTGAATCTAGCTTCTACAAGGACAACGGGAAAATGGACTATTGGTGTAATAGCGTTGGCTTTGGGAACCATTTTTTGGTCTTCTTGGTTTATTTTACAGTCAAAAATAAGCAAGAGATATCCATGCCAGTATTCTAGCACAGCCATCATGTCCTTCTTTGGAGCCATTCAATCAGCTGTTATTTGCTTCTTCACTGACCACAACTTGTCCATTTGGGTTCTCCAGGGAAAGATACAAATCATTGCTATTCTATATGCTGGGATGATAGGTTCGGGTTTGTGTTTTGTGGGCATGTCATGGTGTGTGAAGAAGAGAGGTCCTGTCTTTACTGCAGCATTCAGCCCTCTTGTTCAGATAATGGCAGCAATGATTGATATCCCTGTCTTGCATGAGCAGCTCCATCTGGGAAGTGTGATGGGTTCCATCTTGGTGATTATTGGATTGTACATTCTTCTATGGGGTAAGAGCATGGAAATGCAGAATCGTGTGGTCAAGTTAGTCCAAGAAGCTGAAGAAACCAAGGAACAAGAGCCGCAACCGCAAATACAACAGTTGACAGTGGGTTATGGTTTGATCCGTCTGGGAATAAGGTCCTTCCCTCTGCAGAGCATCACTAGCCCCTCCTCGTCTTCTGATTCAGATAGTTCTTTTGTCATCAAAGTGTCAGATCTTCCTGTTGCTGATATTGTTCTGAAACAAGATTTTGCTTCCAAAATCTACATCAACAAAAGTAGAAGCACACGGCGTGACGGCGATCTCTTGAGATAA 2370 0.4333 MGAVSDGNRSRKKSSSRGHHRFVGVRQRPSGRWVAEIKDSLQKVRLWLGTFDTAEDAARAYDNAARALRGANARTNFELPESSSGGATKRGGSKFVPDCTEPFSFEDVNEPGSEAEGLLGALKAKLLDGKKGKFQFQFLGNCSAPVVQSGMVSRSTQNCSGKKELLLPSSANNTVLSRMNGTGTCSPVHGLMSTLASSNTCAKTVVIPNHDHELVAVASTSSGRVYSHQLCQTPPVTTWPNEVAYDLPWPTQYMSQVPDNSLLASSGAVATLSTWPLSGVTESTVDMTYMDQGQSNSNKSGQMMNMVSMQLPLVGGANEGLWTLEQQQFVQCDQNNSWFSFNGSWDPLLYLWNRIALLKMRSTCDEWKPFIVMIAIDFSFAAVNILLKKVLEEGMNHLVFITYRLSIATIFIAPIGYFRERNDRPRLTFRILCYLFCSAIVGASVTQYFFLLGIQYTSATFSCAFINMVPVVTFMMALPFGLETVKIKSKSGRAKILGSLVCIGGALMLTLYKGKPLFNFSHYESVSPVAKSSEVNLASTRTTGKWTIGVIALALGTIFWSSWFILQSKISKRYPCQYSSTAIMSFFGAIQSAVICFFTDHNLSIWVLQGKIQIIAILYAGMIGSGLCFVGMSWCVKKRGPVFTAAFSPLVQIMAAMIDIPVLHEQLHLGSVMGSILVIIGLYILLWGKSMEMQNRVVKLVQEAEETKEQEPQPQIQQLTVGYGLIRLGIRSFPLQSITSPSSSSDSDSSFVIKVSDLPVADIVLKQDFASKIYINKSRSTRRDGDLLR 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00805 789 SMART rav1_2 21 84 IPR001471 GO:0003700|GO:0006355
Gma15g00805 789 MobiDBLite consensus disorder prediction 1 25 - -
Gma15g00805 789 PANTHER WAT1-RELATED PROTEIN 369 709 IPR030184 GO:0016021|GO:0022857
Gma15g00805 789 SUPERFAMILY Multidrug resistance efflux transporter EmrE 611 690 - -
Gma15g00805 789 ProSiteProfiles AP2/ERF domain profile. 21 78 IPR001471 GO:0003700|GO:0006355
Gma15g00805 789 Pfam AP2 domain 21 70 IPR001471 GO:0003700|GO:0006355
Gma15g00805 789 SUPERFAMILY Multidrug resistance efflux transporter EmrE 403 513 - -
Gma15g00805 789 Pfam EamA-like transporter family 548 686 IPR000620 GO:0016020|GO:0016021
Gma15g00805 789 Pfam EamA-like transporter family 371 508 IPR000620 GO:0016020|GO:0016021
Gma15g00805 789 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Gma15g00805 789 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Gma15g00805 789 Gene3D AP2/ERF domain 20 79 IPR036955 GO:0003700|GO:0006355
Gma15g00805 789 CDD AP2 21 78 IPR001471 GO:0003700|GO:0006355
Gma15g00805 789 PANTHER WAT1-RELATED PROTEIN 369 709 - -
Gma15g00805 789 SUPERFAMILY DNA-binding domain 22 78 IPR016177 GO:0003677
Gma15g00805 789 Coils Coil 690 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00805 Gma-Chr15 6615957 6629760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00805 366 694 Nodulin-like Gene Family AT1G11460 38.788 2.39e-83 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma15g00805 EamA 6e-15 CL0184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00805 - - gmx:100782136 718.768