Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00799 ATGGAACATATCAAAGTTGTTGCATGGCTCATTTCACTTTTTCTGTGGAATTGGGTGCTTGTTGTTGATGGCACTGATAACCTTCTCTCTCCAAAGGGTGTCAACTATGAAGTGGCTGCTTTGATGTCCATGAAGAGTAAGACGAATGATGAGTTCCATGTCCATGTCATGGATGGTTGGGATATTAATTCGGTTGACCCTTGTACTTGGGACATGGTCGGTTGCTCTGCCGAAGGTTATGTCATGTCCCTGGAAATGGCCAGTGTGGGTTTATCTGGAACGATTTCCTCAGGAATTGAAAATTTGAGCCATCTCAAAACATTGTTATTGCAGAACAATCAGTTATCTGGTCCAATCCCGACCGAGATAGGGAAGTTGTTAGAGCTTCAAACCCTTGACCTTTCTGGTAACCAGCTTGATGGAGAAATTCCTAATTCTTTGGGCTGTTTGACTCATCTTAGTTACTTGCGGCTCAGCAAAAATAAACTATCCGGACAGATTCCTCAGTTTGTTGCTAATCTCACAGGCCTTTCATTCTTGGATTTGTCATTCAATAATCTCAGTGGTCCCACTCCAAAAATTTTAGCAAAGGGTTATAGTATTTCAGGAAACAATTTCCTCTGCACCTCTTCCTCACAAATTTGTATGGGCTTTTCAAAACCAGTAAATGATACAGGGTCATCTCAAACGAGTGGCAGTCATCACCAAAGGGTGCTTGTTGTTGCATTGCAAGATTGTGAATTTGATATTGGCCATTTGAAGAGGTTCTCCTTCTGGGAATTGCAGACCGCTACTGGGAATTTCAATTCAAAAAATATCCTAGGACAAGGTGGATTTGGTGTTGTCTACAAAGGATGCCTTGCAAATAAAATGTTGGTGGCAGTAAAGAGGCTGAAAGATCCCAATTACACTGGAGAAGTTCAGTTTCAAACAGAAGTTGAGATGATTGGCTTGGCTGTGCATCGGAACCTCTTGCGTCTTTATGGATTTTGCATGACACCAGATGAAAGGTTGCTTGTTTATCCTTACATGCCCAATGGCAGTGTTGCTGATCACTTGAGAGGAGAATGCGTGTTGcatgaacagtgcaatccaaaaataatccacagggatgttaaggctgcaaacattttgttagatgaaagttttgaagctgtggtgggggattttggtcttgctaagctcttggatcaaagggattcacatgtaactactgcagtgcggggtactgtagggcacattgccccagaatatctctcaactggacagtcttctgaaaaaacagatgtttttggatttggCATATTACTTTTGGAGCTCATAACAGGACACAAAGCACTGGATGCTGGAAATGGTCAGGTCCAAAAGGGAATGATCCTTGATTGGGTTAGAACCTTGTTTGAGGAGAAGCGGCTGGAAGTGCTAGTTGACAGGGATCTTAGGGGATGTTTTGATCCAGTAGGGTTAGAGAAAGCAGTGGAGTTGTCTTTACAATGTACTCAGTCGCATCCCACTTTGCGGCCGAAGATGTCAGAAGCTTTAAAGATTCTAGAAGGTCTGGTAGGGCAGTCAGTGAGGCCAGAGGAGTCACAAGGGGGGACTAACCTATATGATGAAATAACTTGCAGTTTCTCACAAAATTATGGTGATGCTCATGAAGAACCTTCCTTTATTATTGAAGCCATTGAGCTTTCTGGACCTCGGTGA 1707 0.3726 MEHIKVVAWLISLFLWNWVLVVDGTDNLLSPKGVNYEVAALMSMKSKTNDEFHVHVMDGWDINSVDPCTWDMVGCSAEGYVMSLEMASVGLSGTISSGIENLSHLKTLLLQNNQLSGPIPTEIGKLLELQTLDLSGNQLDGEIPNSLGCLTHLSYLRLSKNKLSGQIPQFVANLTGLSFLDLSFNNLSGPTPKILAKGYSISGNNFLCTSSSQICMGFSKPVNDTGSSQTSGSHHQRVLVVALQDCEFDIGHLKRFSFWELQTATGNFNSKNILGQGGFGVVYKGCLANKMLVAVKRLKDPNYTGEVQFQTEVEMIGLAVHRNLLRLYGFCMTPDERLLVYPYMPNGSVADHLRGECVLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDQRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGHKALDAGNGQVQKGMILDWVRTLFEEKRLEVLVDRDLRGCFDPVGLEKAVELSLQCTQSHPTLRPKMSEALKILEGLVGQSVRPEESQGGTNLYDEITCSFSQNYGDAHEEPSFIIEAIELSGPR 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00799 568 Pfam Protein kinase domain 269 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00799 568 Gene3D Ribonuclease Inhibitor 34 216 IPR032675 -
Gma15g00799 568 ProSiteProfiles Protein kinase domain profile. 268 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00799 568 Gene3D Phosphorylase Kinase; domain 1 239 343 - -
Gma15g00799 568 SUPERFAMILY Protein kinase-like (PK-like) 252 527 IPR011009 -
Gma15g00799 568 SMART serkin_6 268 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00799 568 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 244 356 - -
Gma15g00799 568 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 354 568 - -
Gma15g00799 568 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 8 243 - -
Gma15g00799 568 ProSitePatterns Serine/Threonine protein kinases active-site signature. 367 379 IPR008271 GO:0004672|GO:0006468
Gma15g00799 568 Pfam Leucine rich repeat N-terminal domain 35 76 IPR013210 -
Gma15g00799 568 PRINTS Leucine-rich repeat signature 129 142 - -
Gma15g00799 568 PRINTS Leucine-rich repeat signature 174 187 - -
Gma15g00799 568 ProSitePatterns Protein kinases ATP-binding region signature. 274 296 IPR017441 GO:0005524
Gma15g00799 568 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 354 568 - -
Gma15g00799 568 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 244 356 - -
Gma15g00799 568 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 8 243 - -
Gma15g00799 568 SUPERFAMILY L domain-like 37 208 - -
Gma15g00799 568 Gene3D Transferase(Phosphotransferase) domain 1 344 526 - -
Gma15g00799 568 ProSiteProfiles Leucine-rich repeat profile. 128 150 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00799 Gma-Chr15 6563786 6567941 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00799 42 568 Receptor kinase-like Gene Family AT5G45780 65.979 0.0 718
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Gma15g00799 Pkinase 5.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00799 - - gmx:100810610 1035.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00799 15 6563786 6567941 Gma15g00799 15 6563786 6567941 ECH
Gma15g00799 15 6563786 6567941 Gma13g02015 13 35421494 35425357 GST