Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00795 ATGAAGCCCTTTTGCACATTCTTCATTCTTCTTTCGCTGCTTGTTATTCTCGTTGAATCTTCATGCAAAAACGAAGACCAGGAGATGGTGTCCAAGGCCTTCCAATCTGTGTCTGGATTCAACTCTTCCTGGTTCGAAACAGGTTCCAACTGTTCAAATGCTGAGATTAAAGGGATAAATCTTTCGTCCAAGAACCTAAGTGGGAACATCTCGTGGAAGTATCTGAGGAACATATCCAAGTTGAAGGTTCTAGATCTGTCTGGGAATTTTCTACAAGGCCAGGTCCCAAACTGGTTCTGGAGAAGCTCAACCTTATTGGTAGTGAACCTTTCCAGCAACAGGTTCGGAGGGAGCATTAACCCCACTTCCCAAAACGGTTCATTTTCATCACTGCAAAATCTCAATCTCTCACACAACAGGTTCACCAACCGGCTTCACCTCTCTGGTTTCTCAAACCTTGAAAGCCTCGACCTTTCGCACAACAACCTCGGAACCTTGCCCTCCGGGTTCCAAAACCTCACCAATCTACACCACCTCGATCTCTCCAACTGCAACATCAAAGGAAACGTAAAACCCATCTCCTCCCTCACCACACTCTCCTTCTTGGATTTATCAAATAACACGTTGAACGGTAGTTTCCCCTCTGATTTCCCTCCCCTGAACAACATCAAATTCTTGAACGTCTCCCACAACAACCTCAAAGCCTCCACCACCTTAGATAGGTTCAAAAAGTTCGGCAAATCAGCGTTTATCCACGCCGGGCACAACTTCAACTACTACAACGAATCCAAAACGCCAAAACTCGATTCAAATTCAACCCCACAGCACCAACAGCCCCACCACATTCACGCGAAGAAGAAGCGGTCAAAAGAAAAACAGAAGTCAAAACACAAAACCAGAACCATGATTGTGGCCTCGTCCTGTGCCTCGGCACTTGTCGTTGTCTCGTTGTGCATGTGCTTGGTGTGGTGTTGCAGAAGGAGGAGGCAATTGGCGAAGAGGAGCAAGTGGGCGATCTCGAAGCCGGCCCCACTCAGCATCAAGATGATGGAGAAATCTGGACCGTTCGCGTTCGAGACCGAGTCAGGGACATCATGGGTCGCTGACCTCAAAGAACCATCTTCCGCACCCGTGGTCGTGTTCGAGAAGCCACTCATGAACCTCACCTTCGTCGACCTTCTCGCTGGCACGTCACACTTCGGCAAAGACTCCCTTCTCGCTGAGGGCAGGTGTGGGCCCGTTTATCGCGCTGTCTTACCCGGAGACATCCACGTGGCAATCAAAGTCCTCGAAAACGCCAGAGACGTCCATGATGATGACGCTGTCGCTCTCTTCGTTGACCTCTCCCAACTCAAACACCCCAATCTCTTGCCCCTCTCCGGTTACTGTATTGCAGGTAAGGAGAAGCTGGTGTTGTATGAGTTTATGTCGAACGGGGATTTGGGTAGGTGGTTGCAGGAGCTACCAACGGGGGAGACTAACGTGGAGGATTGGAGTGGTGACACGTGGGACATTATTCAAAACGGCGCCGCTTCTCGAGCCTCGCCCCCCGAAAAGATGGGGTGGTTAGTACGGCACCGAATTGCGGTGGGTGTGGCGCGTGGATTAGCGTTTCTGCACCACGCGGGGTCAAGGCCCGTCGTGCACGGACACCTCGTGACGTCCAACGTGCTTCTCGGCGACGACTTCGAGCCGCGAATTGCGGATTTCGGGTTTCGGAAGTTCGGGCGAGAAAGCGCGACGGCGAATTGTTCAACCGAGACGGACGTTTACTGTTTCGGGGTGGTGCTGATGGAGCTGCTGACGGGGAGGGCCGGCACGGCGGAGACGGTGGTTTGGGTGCGGAAGGCGGTGAGGGAGGGTCACGCGGTGAGGGCATTGGACGAGAGGCTCAAACTCGGCGGTGGAAGCGGCGACTCGGAGAGTGAGATGGTGGAGAGCCTCCGAGTCGCGTATTTGTGCACAGCCGAGTCGCCGGGGAAGAGGCCCACCATGCAGCAAGTGTTGGGCCTTCTCAAAGATATTCACCCGAGTCATGCACTCGACTGA 2049 0.5281 MKPFCTFFILLSLLVILVESSCKNEDQEMVSKAFQSVSGFNSSWFETGSNCSNAEIKGINLSSKNLSGNISWKYLRNISKLKVLDLSGNFLQGQVPNWFWRSSTLLVVNLSSNRFGGSINPTSQNGSFSSLQNLNLSHNRFTNRLHLSGFSNLESLDLSHNNLGTLPSGFQNLTNLHHLDLSNCNIKGNVKPISSLTTLSFLDLSNNTLNGSFPSDFPPLNNIKFLNVSHNNLKASTTLDRFKKFGKSAFIHAGHNFNYYNESKTPKLDSNSTPQHQQPHHIHAKKKRSKEKQKSKHKTRTMIVASSCASALVVVSLCMCLVWCCRRRRQLAKRSKWAISKPAPLSIKMMEKSGPFAFETESGTSWVADLKEPSSAPVVVFEKPLMNLTFVDLLAGTSHFGKDSLLAEGRCGPVYRAVLPGDIHVAIKVLENARDVHDDDAVALFVDLSQLKHPNLLPLSGYCIAGKEKLVLYEFMSNGDLGRWLQELPTGETNVEDWSGDTWDIIQNGAASRASPPEKMGWLVRHRIAVGVARGLAFLHHAGSRPVVHGHLVTSNVLLGDDFEPRIADFGFRKFGRESATANCSTETDVYCFGVVLMELLTGRAGTAETVVWVRKAVREGHAVRALDERLKLGGGSGDSESEMVESLRVAYLCTAESPGKRPTMQQVLGLLKDIHPSHALD 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00795 682 Gene3D Ribonuclease Inhibitor 125 304 IPR032675 -
Gma15g00795 682 PRINTS Leucine-rich repeat signature 153 166 - -
Gma15g00795 682 PRINTS Leucine-rich repeat signature 196 209 - -
Gma15g00795 682 PANTHER KINASE, PUTATIVE-RELATED 3 682 - -
Gma15g00795 682 MobiDBLite consensus disorder prediction 264 278 - -
Gma15g00795 682 Gene3D Transferase(Phosphotransferase) domain 1 476 582 - -
Gma15g00795 682 MobiDBLite consensus disorder prediction 279 299 - -
Gma15g00795 682 Gene3D Transferase(Phosphotransferase) domain 1 583 680 - -
Gma15g00795 682 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 3 682 - -
Gma15g00795 682 SMART LRR_typ_2 150 172 IPR003591 -
Gma15g00795 682 SMART LRR_typ_2 78 101 IPR003591 -
Gma15g00795 682 SMART LRR_typ_2 173 203 IPR003591 -
Gma15g00795 682 ProSiteProfiles Leucine-rich repeat profile. 152 174 IPR001611 GO:0005515
Gma15g00795 682 Gene3D Ribonuclease Inhibitor 25 124 IPR032675 -
Gma15g00795 682 MobiDBLite consensus disorder prediction 264 299 - -
Gma15g00795 682 Pfam Leucine rich repeat 130 186 IPR001611 GO:0005515
Gma15g00795 682 Gene3D Phosphorylase Kinase; domain 1 360 475 - -
Gma15g00795 682 ProSiteProfiles Protein kinase domain profile. 400 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00795 682 Pfam Leucine Rich Repeat 80 99 IPR001611 GO:0005515
Gma15g00795 682 Pfam Protein tyrosine and serine/threonine kinase 404 574 IPR001245 GO:0004672|GO:0006468
Gma15g00795 682 SUPERFAMILY Protein kinase-like (PK-like) 378 672 IPR011009 -
Gma15g00795 682 SUPERFAMILY L domain-like 49 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00795 Gma-Chr15 6538636 6541542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00795 59 675 Receptor kinase-like Gene Family AT5G07280 31.108 3.81e-73 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Gma15g00795 PK_Tyr_Ser-Thr 6.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00795 - - gmx:100778920 1340.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00795 15 6538636 6541542 Gma15g00795 15 6538636 6541542 ECH
Gma15g00795 15 6538636 6541542 Gma13g02018 13 35446930 35449723 GST
Gma05g01594 05 37703855 37706930 Gma15g00795 15 6538636 6541542 PCT
Gma08g01077 08 9145360 9148459 Gma15g00795 15 6538636 6541542 PCT
Gma15g00795 15 6538636 6541542 Gma05g01594 05 37703855 37706930 PCT
Gma15g00795 15 6538636 6541542 Gma08g01077 08 9145360 9148459 PCT