Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00793 ATGTGGTTCCACCACCCTGCTTCCATAGCCTTCACACTTTCCCTGTTGGCTGTTCCTCTCTTGGTCTTCCAAGAGCCAATTAACAAAACGGAAAGCATTAGAACAAGTCAATCTTCTGTGCAGCTGCTCATTGTTCTCAGTCCTCTTTCGTGGAAGAATCATGGCCTTCTTCACACAACATGTGGAACTCCAGCTTATGTAGCTCCTGAGGTGATAAAGAAGAAAGGATATGATGGAGCCAAGGCAGATATTTGGTCTTGTGGTGTGATTCTCTTTGTTCTCTTGGCAGGTTTTCCTCCTTTCAAGGATAAAAATCTGATGGAGATGTACAAGAAGATTATCAAAGCAGATTTCAAGTTCCCACAATGGTTCTCTTCAGATTTGAAAAGGCTTCTTTATAGGATCCTTGATCCCAATCCAAAGACAAGAATTGATATTTCTAAGATTGTGCAAAGCCGTTGGTTTAGAAAGGGGTATGCCCAGATTGAAGAATTTCAGCTGCCACCATTGCCCCCTAGAAATGGTAAGGATATCTCAGAAGTTCAAGCTGCATTTGCTTCTTCATCTGATTCAGATTCAGATGGTAGTCCAATGTCAAATAAAGAAGAAAGCCCCATGAAGCTATATCGGTTCAATGCTTTTGATTTGATATCAATCTCTTCAGGTTTTGATCTTTCTGGTCTGTTTGAGGATGATCAGAATGAAAGGCAATTGGCAAGATTTACAACTAGAAAACCACCTTCAACCATTGTTTCAATGCTTGAAGAAATAGCACAAATAGATAGTAGATTTAAGATCTTGAAGAAAAATGGAGTTGTTAGATTGGAGGGATGCAAGACAGGGATAAATGGCCAACTCACTATAGATGCAGAAATTTTTGAAGTTACATCTTCCTTTCATGTTGTTGAGGTGAAGAAAATTGCTGGAAACACATTGGAATATTGGAAATTCTTGGACCAGTACTTGAAACCTCTGAATGAAATGGTTTGGGTCTGGCAAAGATATGAGCAGCAGCAATAG 1020 0.3971 MWFHHPASIAFTLSLLAVPLLVFQEPINKTESIRTSQSSVQLLIVLSPLSWKNHGLLHTTCGTPAYVAPEVIKKKGYDGAKADIWSCGVILFVLLAGFPPFKDKNLMEMYKKIIKADFKFPQWFSSDLKRLLYRILDPNPKTRIDISKIVQSRWFRKGYAQIEEFQLPPLPPRNGKDISEVQAAFASSSDSDSDGSPMSNKEESPMKLYRFNAFDLISISSGFDLSGLFEDDQNERQLARFTTRKPPSTIVSMLEEIAQIDSRFKILKKNGVVRLEGCKTGINGQLTIDAEIFEVTSSFHVVEVKKIAGNTLEYWKFLDQYLKPLNEMVWVWQRYEQQQ 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00793 339 Pfam Protein kinase domain 52 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00793 339 SMART serkin_6 21 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00793 339 Pfam NAF domain 211 259 IPR004041 GO:0007165
Gma15g00793 339 ProSiteProfiles Protein kinase domain profile. 1 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00793 339 ProSiteProfiles NAF domain profile. 206 230 IPR018451 GO:0007165
Gma15g00793 339 CDD CIPK_C 212 325 - -
Gma15g00793 339 Gene3D Kinase associated domain 1, KA1 210 331 - -
Gma15g00793 339 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 50 339 - -
Gma15g00793 339 Gene3D Transferase(Phosphotransferase) domain 1 46 209 - -
Gma15g00793 339 SUPERFAMILY Protein kinase-like (PK-like) 54 201 IPR011009 -
Gma15g00793 339 PANTHER - 50 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00793 Gma-Chr15 6513898 6516765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00793 50 333 CBL-interacting serine-threonine protein kinases AT5G45820 53.819 4.68e-97 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gma15g00793 Pkinase 6.1e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00793 K07198 - gmx:100807927 514.612