Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00789 ATGCCAGAAGGGTATGAGATTCATGACAATGAGGAAACTTCATCGGGATGTTCGTCTTCATTTGATTTGAATGAAGAATTAGCTTGCAGTGAAGATAACAGTGATACAGAAGAGTGCTGTGAGCTCACAACAACTAATGAGAAAGCAAAGGATGAAGGCACTTCAGCAAATGGAAGTAGCATATCATCAAGAGAAGGAAATGAGAGAAGAGGAACGGTAAGACAATATGTTAGATCCAAGATGCCTAGGCTTCGGTGGACTCCTGAGCTTCATCATTCATTTGTGCATGCTGTTGAAAGACTTGGTGGTCAAGAGAGAGCTACACCCAAGTTGGTGCTTCAACTAATGAATGTGCGAGGACTCAGCATTGCTCATGTCAAAAGTCACTTGCAGATGTATCGAAGCAAGAAACTTGACGAGGTTGGGCAAGTACTAAGTCAAACGTCCAAGTCCAACCAAGAAGTAGCTCGTAGACCTTTGATACTCCATCAGTGCATAATTCCTCAGCAACATCTTATGATGGGGAATGGTGGAATTATTCTAGCAAGTAATTTCAACAAACATAATCATTTCCCAAGTCTTCTGCATCCCTCCTTCTCCCTATCACGTTCACAGACAAACGACTCCGATTCAAGGCACCAACATTGGTACACCAATCACCAAGATTTTAGCATACCAATAGCTTCAAGCCAAATTCAACCAAAGGATACACGCGGCCGAATTGCCCCCATGAGACCAAGCCAATTGCTTGAAGAGAAAAGGTGGCCTCCGTTAGAAATTTTGAACAATCATCAATCGATGTTGAAAAGGTTACCTGCCATTGTTGCTCCTAAAAATGGGTCACAAGCTGTTCAACCAGCTGAATGGAGTTTTGTGAATAACACAAGCATCAGAGATTATCTATCGAACAACTCCAATGAACCTCTCAACAATTCCAACAGTTTAAAGCTAGAATTTGATCCTCCATTTCGGATTAAGAAAGACGAGCAACAATTGCCTGATTTGCAACTGGGTTTGAGTCACACAGTTGGAACTGATGGCAAGATAGATCATTATAAAGAAACCCCAGAAATCAGCACCAAGCTTTCACTTTCTTAG 1098 0.418 MPEGYEIHDNEETSSGCSSSFDLNEELACSEDNSDTEECCELTTTNEKAKDEGTSANGSSISSREGNERRGTVRQYVRSKMPRLRWTPELHHSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEVGQVLSQTSKSNQEVARRPLILHQCIIPQQHLMMGNGGIILASNFNKHNHFPSLLHPSFSLSRSQTNDSDSRHQHWYTNHQDFSIPIASSQIQPKDTRGRIAPMRPSQLLEEKRWPPLEILNNHQSMLKRLPAIVAPKNGSQAVQPAEWSFVNNTSIRDYLSNNSNEPLNNSNSLKLEFDPPFRIKKDEQQLPDLQLGLSHTVGTDGKIDHYKETPEISTKLSLS 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00789 365 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 2 365 IPR044848 GO:0003700
Gma15g00789 365 MobiDBLite consensus disorder prediction 28 72 - -
Gma15g00789 365 SUPERFAMILY Homeodomain-like 80 136 IPR009057 -
Gma15g00789 365 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 82 137 IPR006447 GO:0003677
Gma15g00789 365 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 2 365 - -
Gma15g00789 365 Pfam Myb-like DNA-binding domain 84 134 IPR001005 -
Gma15g00789 365 MobiDBLite consensus disorder prediction 49 66 - -
Gma15g00789 365 MobiDBLite consensus disorder prediction 344 365 - -
Gma15g00789 365 Gene3D - 81 138 - -
Gma15g00789 365 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 78 138 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00789 Gma-Chr15 6471269 6473990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00789 73 166 G2-like Transcription Factor Family AT2G42660 62.766 1.13e-32 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma15g00789 Myb_DNA-binding 1.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00789 - - gmx:100787474 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00789 15 6471269 6473990 Gma15g00789 15 6471269 6473990 ECH
Gma15g00789 15 6471269 6473990 Gma13g02024 13 35511560 35515226 GST
Gma05g01591 05 37684127 37689959 Gma15g00789 15 6471269 6473990 PCT
Gma08g01074 08 9122640 9128747 Gma15g00789 15 6471269 6473990 PCT
Gma15g00789 15 6471269 6473990 Gma05g01591 05 37684127 37689959 PCT
Gma15g00789 15 6471269 6473990 Gma08g01074 08 9122640 9128747 PCT