Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00781 ATGCCGGACTTCCACGACTCCCTCTCCACCACGCCGCCGCCGCAGCCGTCCCGCCCCGTCCCCGTCCGCGAGGACTGCTGGTCCGAGGAGGCCTCCGCCACGCTCGTCGACGCCTGGGGCCGCCGCTACCTCGAGCTCAACCGCGGCAACCTCCGCCAGAAGGACTGGCAGGACGTCGCCGACGCCGTCAACGCGCTCCACGGCCACACTAAAAAGACGCACCGTACCGACGTCCAGTGCAAGAACCGCATCGACACCATTAAGAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCGGCCTCCAACGGTACTCTCTCTTCCTCTTGGCCTTTCTACGAGCGCTTGGACGCTCTTATCGGCCCTAATTTTAGCGCGAAGAAATCCACCTCCCCGCCGTCTCCGTCGCCGCCGGTGGCTCTTCCTTTGCTGCCGCATCGGAAGAACCAAAACCAGAACCCTTCCTCTTCTCCTGCGATTTCGGTGCCGCCAACGGCCGTCGCGCTGCCGCAGAAGCGCTCTGCGGCAGCGGCGATGGACGAGGGTTACTTCAGGAGGAATTACTCCGCCGTGGCTGCCGCAGCGGCGGCGGCGGAGGCTGATGAGGAGGAAGATGAGGATGAGGCGGAGGATTTGGAGGAGGAGGAAGAATGTGAAGAGGAAGGGAGGGGGAGCGAAGTGGAGGAAGGGGAGAAGGAGAGGGAAGGGATGAGGAGGTTGGCGAAGGCGATAGAGAGGTTTGGTGAAGTGTATGAGAGAATGGAGGCGCAGAAGCTGAGGCAGATGGTGGATTTGGAGAAACAGAGGATGCAGTTTGCTAAAGATCTTGAAGTGCAGAGGATGGAGATGTTTATGGACACACAGGTTCAGCTCGAGAGAATCAAGCGCGGGAAAAGATCTGGCTCTAACGATATGTATAGCTAG 921 0.5983 MPDFHDSLSTTPPPQPSRPVPVREDCWSEEASATLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCKNRIDTIKKKYKIEKARVSASNGTLSSSWPFYERLDALIGPNFSAKKSTSPPSPSPPVALPLLPHRKNQNQNPSSSPAISVPPTAVALPQKRSAAAAMDEGYFRRNYSAVAAAAAAAEADEEEDEDEAEDLEEEEECEEEGRGSEVEEGEKEREGMRRLAKAIERFGEVYERMEAQKLRQMVDLEKQRMQFAKDLEVQRMEMFMDTQVQLERIKRGKRSGSNDMYS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00781 306 Coils Coil 236 256 - -
Gma15g00781 306 MobiDBLite consensus disorder prediction 1 24 - -
Gma15g00781 306 Pfam Myb/SANT-like DNA-binding domain 24 118 IPR044822 -
Gma15g00781 306 MobiDBLite consensus disorder prediction 197 223 - -
Gma15g00781 306 PANTHER OS05G0560600 PROTEIN 1 302 - -
Gma15g00781 306 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 1 302 IPR044823 -
Gma15g00781 306 MobiDBLite consensus disorder prediction 123 163 - -
Gma15g00781 306 MobiDBLite consensus disorder prediction 194 235 - -
Gma15g00781 306 MobiDBLite consensus disorder prediction 145 161 - -
Gma15g00781 306 Gene3D - 27 93 - -
Gma15g00781 306 Coils Coil 194 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00781 Gma-Chr15 6409778 6415097 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00781 23 305 Trihelix Transcription Factor Family AT3G14180 31.921 3.68e-45 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma15g00781 Myb_DNA-bind_4 7.4e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00781 - - gmx:100785349 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00781 15 6409778 6415097 Gma15g00781 15 6409778 6415097 ECH
Gma15g00781 15 6409778 6415097 Gma13g02033 13 35566943 35571501 GST