Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00758 ATGGGATCTAGAGACAAAGATGGTGAGGAGTCACTTGGTATAGGCCTTCAGGTGATGCTAGCAGCAGCTTTCTCTTTATTTGGTGTGATCTTATTAATCATAATCTTCCATTTTTGTGTAAAATATTTCATTAAACGCCAACAAAGGAGACGCCAAAACAACTTTCTTTATCAAATCAGCACTCAAATTGCACCAATTGATGTGAGTTCTGTGGAGCCACGCAACTCTGGCTTTGACCCTTCGATCATAGCCTCTTTGCCTAAACTCTTGTACAAGCAAACGGACCAATTCAAGCAAGGTGAAGTTGTAGAGTGCTCGGTTTGCTTAGGCACTATTGTGGAAGATGCAATCACTAGGGTTCTACCAAATTGTAAGCACATTTTTCATGCTGATTGTGTTGATAAATGGTTTAATTCTAACACCACATGCCCAATTTGCCGCACCGTGGTTGACCCAAATGTGCAACCAGAACATGGTCATGTAGGTGCCACACGGGTTCACAACCAAGTCCAACCCACAGCACCACCGGCTGAGGGTGGTGTTGAGCTACAAGATGATAGTGAATTGGAGAGGGTGGGGTGTTCAGGTTTGAGAATAGGATCTTTTCATAGGATGATTGGTAATAGGGAAAGACCAGGAAGAAGGACTCAGAGCTGTGATGGATCTACCATATTAGATATAGAAAGGCGCTAA 693 0.4315 MGSRDKDGEESLGIGLQVMLAAAFSLFGVILLIIIFHFCVKYFIKRQQRRRQNNFLYQISTQIAPIDVSSVEPRNSGFDPSIIASLPKLLYKQTDQFKQGEVVECSVCLGTIVEDAITRVLPNCKHIFHADCVDKWFNSNTTCPICRTVVDPNVQPEHGHVGATRVHNQVQPTAPPAEGGVELQDDSELERVGCSGLRIGSFHRMIGNRERPGRRTQSCDGSTILDIERR 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00758 230 Pfam Ring finger domain 104 147 IPR001841 -
Gma15g00758 230 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 153 IPR013083 -
Gma15g00758 230 ProSiteProfiles Zinc finger RING-type profile. 105 147 IPR001841 -
Gma15g00758 230 PANTHER RING FINGER DOMAIN-CONTAINING 1 230 - -
Gma15g00758 230 SMART ring_2 105 146 IPR001841 -
Gma15g00758 230 SUPERFAMILY RING/U-box 85 153 - -
Gma15g00758 230 PANTHER RING-H2 FINGER PROTEIN ATL40-LIKE 1 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00758 Gma-Chr15 6215238 6215930 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00758 11 229 C3H Transcription Factor Family AT2G42360 32.599 5.84e-31 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00758 K19038 - gmx:100779105 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00758 15 6215238 6215930 Gma15g00758 15 6215238 6215930 ECH
Gma15g00758 15 6215238 6215930 Gma13g02063 13 35776506 35777460 GST