Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00750 ATGGCAATCCAAAACGAAGGGCAGCAAAGAACAAGTAGGGAAAGTAAGTCCACTCCTCCCTGGGTGTCCCAGAAACCACAAAATATTCTATACCTATGCCCCCACCATTCTATAGATTTATGCCGAGTCCAAAACCACTTGACACACCTTGCCAACTTGCCCTTCCTTCAAAAACCAAAGAGAGACAGACCGACTCCGAGAAGAAACAAAGAAACAAACATGGGAAGCAACAAAACCTACGAGGAAGAAGAAAGCACGGTTCTATTTTCCCATTCCCAAACACAAACAGAGTTGTTACCCTTCAACGAGAACGACCCGCAGGACATGGTCATATACCAAGTCCTCAACGAAGCCAATGCTCTCACCAACACATTTCTCCCTCAGAGGCTTCACCAACCTCAGTTGTGCCTCGAGCCCACCAGAAACATAACAAAGAAGCACTACAGAGGAGTTCGGCGCCGCCCCTGGGGAAAATACGCCGCTGAGATTCGCGACTCTGCCCGCCACGGCGCCAGAATATGGCTCGGCACCTTCCAAACCGCTGAAGAGGCTGCCATGGCTTATGACCGAGCCGCGTTCAAGATGAGGGGCTCCAAGGCTTTGCTCAATTTCCCAGCTGAAATTGTTGCTGCAACGGAGTTATCTTTCAATAATACTAATAGTAACAATCACGATGCTGTTTCTGATTCCAGTGCTGGTAGCTCTTGCACGAACAATTCCGTTCAGCTAAATAGGAATCAGTCAGAAAGCTGCACAAGTAGCACAGGACACCGAAAATTAATTCATTTAATGTGA 795 0.478 MAIQNEGQQRTSRESKSTPPWVSQKPQNILYLCPHHSIDLCRVQNHLTHLANLPFLQKPKRDRPTPRRNKETNMGSNKTYEEEESTVLFSHSQTQTELLPFNENDPQDMVIYQVLNEANALTNTFLPQRLHQPQLCLEPTRNITKKHYRGVRRRPWGKYAAEIRDSARHGARIWLGTFQTAEEAAMAYDRAAFKMRGSKALLNFPAEIVAATELSFNNTNSNNHDAVSDSSAGSSCTNNSVQLNRNQSESCTSSTGHRKLIHLM 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00750 264 MobiDBLite consensus disorder prediction 222 256 - -
Gma15g00750 264 Gene3D AP2/ERF domain 146 207 IPR036955 GO:0003700|GO:0006355
Gma15g00750 264 PRINTS Ethylene responsive element binding protein signature 148 159 IPR001471 GO:0003700|GO:0006355
Gma15g00750 264 PRINTS Ethylene responsive element binding protein signature 171 187 IPR001471 GO:0003700|GO:0006355
Gma15g00750 264 SMART rav1_2 147 211 IPR001471 GO:0003700|GO:0006355
Gma15g00750 264 PANTHER PATHOGENESIS-RELATED GENES TRANSCRIPTIONAL ACTIVATOR PTI5 62 222 - -
Gma15g00750 264 PANTHER DNA-BINDING DOMAIN 62 222 IPR044808 GO:0003700|GO:0009873
Gma15g00750 264 ProSiteProfiles AP2/ERF domain profile. 147 205 IPR001471 GO:0003700|GO:0006355
Gma15g00750 264 Pfam AP2 domain 147 197 IPR001471 GO:0003700|GO:0006355
Gma15g00750 264 MobiDBLite consensus disorder prediction 1 23 - -
Gma15g00750 264 MobiDBLite consensus disorder prediction 60 78 - -
Gma15g00750 264 SUPERFAMILY DNA-binding domain 147 207 IPR016177 GO:0003677
Gma15g00750 264 MobiDBLite consensus disorder prediction 55 82 - -
Gma15g00750 264 CDD AP2 146 206 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00750 Gma-Chr15 6165592 6166496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00750 99 208 AP2-EREBP Transcription Factor Family AT5G47220 50.000 1.20e-38 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma15g00750 AP2 7.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00750 K13433 - gmx:100811533 366.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00750 15 6165592 6166496 Gma15g00750 15 6165592 6166496 ECH
Gma15g00750 15 6165592 6166496 Gma13g02073 13 35861885 35862971 GST