Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00747 ATGGGGTTGATCGATCTGAACACCACGGAGGATGATGAAGCTGCTCCATTATCTGCTTCTTCTTCTCACTCGGGGATAAGCACTTCTGCTTCAACCTTGGTTGTTTCTCCTCCTCCTTCTGTGTGCTTGGAACTGTGGCACGCGTGTGCGGGCCCTTTGATCTCTCTGCCTAAGAGAGGAAGTGTTGTTGTTTACTTGCCACAGGGACACTTTGAGCATGTTCAGGATTTTCCGGTCAATGCTTTTGATATCCCACCCCATGTGTTCTGTCGTGTTCTTGATGTCAAGCTCCATGCAGAGGAAGGGAGTGATGAAGTGTACTGCCAAGTGTTGTTGGTTCCTGAAAGTGAGCAAGTGGAGCATAGCTTGCGGGAAGGGGAAATTGTTGCTGATGGGGAAGAGGAGGATACTGGAGCTACGGTGAAGTCAACAACTCCCCATATGTTCTGCAAGACTCTCACAGCTTCAGACACCAGCACTCATGGTGGATTCTCAGTTCCCCGTCGGGCAGCTGAAGATTGCTTTCCTCCCCTGGATTACAGTCAACAGAGACCTTCACAAGAACTTGTGGCAAAGGATCTTCATGGCCTGGAATGGAGGTTTCGTCATATATATAGGGcaggccaaccacggaggcatttgctcacaactgggtggagtgcatttgtgaacaaaaagaagcttgtttctggagatgcTGTATTGTTTCTTAGGGGCAATGATGGAGAACTGAGATTAGGGATTCGCAGGGCAGCTCAGTTGAAATGGGCTGGTTCCTTTGCAGTTCCCTCAGGTCAGCAATTGAATCCTGCAACTCTCATGGATGTTGTTAATGCATTATCTACAAGATGTGCATTTAGTGTTTGCTATAATCCAAGGTTCAGCTCTTCGGAATTCATCATACCTGTTCACAAATTCTTAGAGAGCCTTGACTGTTCTTATTCAGTTGGAATGAGGTTCAGGATGCGTTTTGAAACTGAAGATGCGGCAGATCGAAGATTCACTGGATTAATTGCTGGAATTAGTGATGTTGATCCTGTTAGATGGCCCGGATCAAAATGGAGATGCCTACTGGTAAGGTGGGATGACATAGAAGCTGCTAGGCACAATAGGGTTTCCCCATGGGAAATTGAGCCATCTGGTTCTGCTTCAAATTCCAGTAACTTGATGGCAGCTGGTTTGAAGAGGAACAGGATTGAAATGACTTCAGCAAAGCTGGAATTTCCCAATCCCAATGGGATTCAAACATCAGACTTTGGGGAATCGTTAAGGTTCCGGAAGGTCTTGCAAGGTCAAGAAATTTTGGGTGTTAATACTCCCCCCTTTGATGGTATTAATGCTCAGAGTCCCTGGTTATACGAGTTAGGGAGGTGCTATCCTGGTTCAAACTGTTCTGGGATTCCTCCAACAGGAAATAACATCAGAGTGCCGCATCCGGCATCTGATTTTTCCTGCAATGGCATAGGCTTTAGTGAATCTTTCCGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATTCTTCCAAGCCAACCATATGGAAGAGCCTTATCTATTGAGGAGGCTCGAGCAAATGGTCGCTATGGATTTTATGATGGCTGTCAGTTACTTAACTCCAGAAATGGATGGTCTGCACAGATGCATGACAATGCTTCACATTTGCATGCATCTGTTACACCTGCGCAAGTGTCATCTCCATCATCTGTGTTAATGTTCCAGCAAGCAGTTAATCCAGTTTCAAACTGTGATTATAACATTAACAAATGTAATAAGGAAATGGAGGGTAGAATCCATTATCAAGGCTTATACACATCTGAAATGAAAGGTAGAACATTGGCATCTTCCCCATCTGACGATCTTATTGTATCTAGGCGAGCTCCAGAGGGTGCTAGTTCTATAGGTATGTTTGATGTTCATAATCAGTTGGGTAGTTCACAGTTACATGAATCAGTGTCAGCATTGAGAAGCAGTCAAAAGTTGGTTTCCTCATGTAAAAGTAGTTGCAGACTCTTTGGTTTTTCATTGACTGAGGACACACATGTTGCAAATGAAGAGGTATCAGCCTCTACCATCACTTTACCATTGAGTTCTGGACCTTCGTTTACTAGACTTGTTGAAGATGAGTTCCATCCTGGCCATTCGCATCCGAGTAAGGCGGTTGGAAGTAACTGCACCAAGAGTGTATTGCAGTATTGA 2190 0.4315 MGLIDLNTTEDDEAAPLSASSSHSGISTSASTLVVSPPPSVCLELWHACAGPLISLPKRGSVVVYLPQGHFEHVQDFPVNAFDIPPHVFCRVLDVKLHAEEGSDEVYCQVLLVPESEQVEHSLREGEIVADGEEEDTGATVKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFRHIYRAGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGNDGELRLGIRRAAQLKWAGSFAVPSGQQLNPATLMDVVNALSTRCAFSVCYNPRFSSSEFIIPVHKFLESLDCSYSVGMRFRMRFETEDAADRRFTGLIAGISDVDPVRWPGSKWRCLLVRWDDIEAARHNRVSPWEIEPSGSASNSSNLMAAGLKRNRIEMTSAKLEFPNPNGIQTSDFGESLRFRKVLQGQEILGVNTPPFDGINAQSPWLYELGRCYPGSNCSGIPPTGNNIRVPHPASDFSCNGIGFSESFRFQKVLQGQEILPSQPYGRALSIEEARANGRYGFYDGCQLLNSRNGWSAQMHDNASHLHASVTPAQVSSPSSVLMFQQAVNPVSNCDYNINKCNKEMEGRIHYQGLYTSEMKGRTLASSPSDDLIVSRRAPEGASSIGMFDVHNQLGSSQLHESVSALRSSQKLVSSCKSSCRLFGFSLTEDTHVANEEVSASTITLPLSSGPSFTRLVEDEFHPGHSHPSKAVGSNCTKSVLQY 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00747 729 Pfam Auxin response factor 277 357 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Gma15g00747 729 Gene3D - 147 252 IPR015300 -
Gma15g00747 729 CDD B3_DNA 147 250 IPR003340 GO:0003677
Gma15g00747 729 Pfam B3 DNA binding domain 149 251 IPR003340 GO:0003677
Gma15g00747 729 ProSiteProfiles B3 DNA-binding domain profile. 149 252 IPR003340 GO:0003677
Gma15g00747 729 Gene3D - 313 387 - -
Gma15g00747 729 SUPERFAMILY DNA-binding pseudobarrel domain 142 253 IPR015300 -
Gma15g00747 729 SMART B3_2 149 252 IPR003340 GO:0003677
Gma15g00747 729 MobiDBLite consensus disorder prediction 709 729 - -
Gma15g00747 729 PANTHER AUXIN RESPONSE FACTOR 33 729 - -
Gma15g00747 729 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 33 729 IPR044835 GO:0003677|GO:0006355|GO:0009725
Gma15g00747 729 MobiDBLite consensus disorder prediction 13 29 - -
Gma15g00747 729 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00747 Gma-Chr15 6128253 6132995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00747 148 508 B3 DNA Binding Superfamily AT2G33860 58.516 9.95e-140 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Gma15g00747 B3 6.9e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00747 K14486 - gmx:100810458 1462.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00747 15 6128253 6132995 Gma15g00747 15 6128253 6132995 ECH
Gma15g00747 15 6128253 6132995 Gma13g02076 13 35897278 35903190 GST