Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00742 ATGACATGGTGCAATGACTCTGATGAGGATAGGGTTATTGAATCAACGACGCCAACAATAACTATTACTCCTAACACTGATGGCATAAAGCTCACCGAAGAAATTAGAACCATAACATGCCCCTCGTGCGGCCATAACATTGAATTCAAAGATCAGGGTGGAATCCATGACTTGCCGGGGTTACCAGCTGGAGTGAAGTTTGACCCAAATGACCAAGAAATATTAGAACATTTGGAGGCAAAAGTGGCGTCTGATGCATGCAAGCTTCATCCCCTTATTGACGAGTTCATACCAACGCTTGAAGGCGAAAATGGGATCTGTTATACACACCCAGAAAAGCTACCAGGTGTTAGCAAAGATGGACAGATCCGCCACTTCTTTCACAGGCCCTCAAAAGCATACACAACTGGAACGAGGAAAAGAAGAAAAGTTCACACTGATGATGAAGGAAGTGAAACAAGATGGCACAAAACGGGAAAAACTAGAGCAGTTTTTGCAGCAGCCGGTGGTGCAGTAAAAGGTTTTAAGAAAATACTAGTACTCTACACCAACTATGGAAGACAAAAGAAGCCTGAGAAAACTAATTGGGTGATGCATCAATACCATCTTGGCAGTACTGAAGAAGAGAAAGATGGAGAATTAGTTGTTTCAAAGGTCTTCTATCAGACACAACCTAGACAATGTGGCAATCCCATTATAATAAAGGATTCATACGAAAAAATGTTGAATGATGGAAGTGGCCAAGACAACATTAATATATCATTAATACCTAAAACTACTGCAACTCTTTTGGATTGCTACACTGCTCCTTACATAGATTATGATCACGTCCATGTGAGTCATAACAGGGAAAGTTCCTCACAACTAATTATTCCCAGCTCGGTTGTTCAAGTTGATGGCTCTTATATTCGCTTAACAATGGATGCAAAGAAAGCAAGATTTGAAAGTAACACTGGGAAGAGATTCTAG 969 0.4076 MTWCNDSDEDRVIESTTPTITITPNTDGIKLTEEIRTITCPSCGHNIEFKDQGGIHDLPGLPAGVKFDPNDQEILEHLEAKVASDACKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDDEGSETRWHKTGKTRAVFAAAGGAVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSTEEEKDGELVVSKVFYQTQPRQCGNPIIIKDSYEKMLNDGSGQDNINISLIPKTTATLLDCYTAPYIDYDHVHVSHNRESSSQLIIPSSVVQVDGSYIRLTMDAKKARFESNTGKRF 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00742 322 Pfam No apical meristem (NAM) protein 62 203 IPR003441 GO:0003677|GO:0006355
Gma15g00742 322 Gene3D NAC domain 70 226 IPR036093 GO:0003677|GO:0006355
Gma15g00742 322 SUPERFAMILY NAC domain 55 222 IPR036093 GO:0003677|GO:0006355
Gma15g00742 322 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 1 301 - -
Gma15g00742 322 MobiDBLite consensus disorder prediction 140 155 - -
Gma15g00742 322 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 301 IPR044799 GO:0003700
Gma15g00742 322 MobiDBLite consensus disorder prediction 134 155 - -
Gma15g00742 322 ProSiteProfiles NAC domain profile. 61 222 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00742 Gma-Chr15 6099398 6102762 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00742 1 232 NAC Transcription Factor Family AT4G28500 72.340 5.12e-122 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma15g00742 NAM 1.8e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00742 - - gmx:100809389 657.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00742 15 6099398 6102762 Gma15g00742 15 6099398 6102762 ECH
Gma15g00742 15 6099398 6102762 Gma13g02081 13 35944802 35948516 GST