Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00730 ATGGCGCCCAGGGACAAGACTAGTGCCGTTAAGCCTAGCGGTAACGCCGGGGTGAAGGACCTGCATTTTCGTGGAGTCAGGAAGAGACCGTGGGGGAGGTTCGCCGCCGAGATCAGAGATCCCGCCAAGAAGACCCGCGTCTGGCTCGGAACCTTCGACACCGCGGAGGAGGCGGCCCGTGCCTACGACGCCGCCGCGCGGGAGTTTCGCGGCCCTAAGGCGAAGACAAACTTCCCTCTCCCTTCGGAAAATTTTAAGAACGCGAGCCCTAGCCAAAGCAGCACGGTGGAGTCCTCCAGCCGCGACCGCGACGTCGCCGCCGATTCCTCTCCGCTCGACCTCAACCTCGCCCCCGTCGCCGTCTCCTCCGCTCGATTCCCCTTCCGGAACCAGTTCCCGGTTTTCCCCGGCGCGGTGCCGGCGGCGAACCAGGTTATGTACTTCGACGCCGTCCTACGCGCCGGCATGGCCGGTCCACGTGGCTTCGCGTTTGGCTACAATCCTCATCCCGTCGCGGCGAGTGAGTACCACGCGACGACGAGCGACTCGGACTCGTCCTCCGTTATCGATCTGAATCATAACGAAGGCGTTGTTAAGGGGAACGTAGAGAAAGTAGCAGCGTTCGATAAGGAAGGAAGGGAAGGGAAGCCATAA 654 0.6239 MAPRDKTSAVKPSGNAGVKDLHFRGVRKRPWGRFAAEIRDPAKKTRVWLGTFDTAEEAARAYDAAAREFRGPKAKTNFPLPSENFKNASPSQSSTVESSSRDRDVAADSSPLDLNLAPVAVSSARFPFRNQFPVFPGAVPAANQVMYFDAVLRAGMAGPRGFAFGYNPHPVAASEYHATTSDSDSSSVIDLNHNEGVVKGNVEKVAAFDKEGREGKP 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00730 217 CDD AP2 22 79 IPR001471 GO:0003700|GO:0006355
Gma15g00730 217 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4-LIKE 1 196 - -
Gma15g00730 217 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Gma15g00730 217 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Gma15g00730 217 MobiDBLite consensus disorder prediction 73 109 - -
Gma15g00730 217 Pfam AP2 domain 22 71 IPR001471 GO:0003700|GO:0006355
Gma15g00730 217 SMART rav1_2 22 85 IPR001471 GO:0003700|GO:0006355
Gma15g00730 217 Gene3D AP2/ERF domain 22 80 IPR036955 GO:0003700|GO:0006355
Gma15g00730 217 ProSiteProfiles AP2/ERF domain profile. 22 79 IPR001471 GO:0003700|GO:0006355
Gma15g00730 217 SUPERFAMILY DNA-binding domain 22 80 IPR016177 GO:0003677
Gma15g00730 217 MobiDBLite consensus disorder prediction 1 22 - -
Gma15g00730 217 MobiDBLite consensus disorder prediction 80 100 - -
Gma15g00730 217 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00730 Gma-Chr15 6014684 6015615 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00730 1 133 AP2-EREBP Transcription Factor Family AT5G44210 53.147 1.80e-37 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Gma15g00730 AP2 3.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00730 K09286 - gmx:100803173 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00730 15 6014684 6015615 Gma15g00730 15 6014684 6015615 ECH
Gma06g02159 06 38835139 38835813 Gma15g00730 15 6014684 6015615 ECH
Gma13g02430 13 39046212 39047198 Gma15g00730 15 6014684 6015615 ECH
Gma12g01049 12 11894047 11894664 Gma15g00730 15 6014684 6015615 ECH
Gma06g02603 06 49332950 49333923 Gma15g00730 15 6014684 6015615 ECH
Gma15g00730 15 6014684 6015615 Gma13g02098 13 36084939 36087147 GST