Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00718 ATGGAGCAAGGAGTCGAAGAAGGAGGTGGCATGAATAAGATACCTCGGGATTCAAGAGTGAAGGAGATAAGACAAGGTGATGCACAAATTCAGGTTCAGGCTCCTCAGCAACCCCAAAAGTGTCCTCGATGCGACTCTCTCAACACCAAATTTTGCTATTACAACAACTATAGCCTCTCACAGCCTCGTTACTTTTGCAAAACATGCAGGAGGTACTGGACTCAAGGTGGAACCTTGAGGAACGTTCCTGTTGGTGGCGGTTGCCGCAAGGGGAAGCGCGCCAAGAGTTCTAACTCATCTTCTTCGGAGAATATGAATTCTTCTTCCAGATCACTGCCTCAACAACAACAACAACCGCAAGGGGTGGTGGTTCAAACTCAAGCACCACCCTTAACAACGGTGGTGAAGGCCAAAGACCCTTCTTCCGTTGTGGCTTCAACCTTTTACCAAAGTGGTGGGTACTTGTCTTCTTTGGCTGCTATGCATTCACTCAACTCATCATCACACCCTTTTGATCACTCTCTAAATTTTGCGGGTAGTGACACCTTGCGTTCTTCCAATTTGGGCCTTCTATCTGGTTTCAATGTTCAGCGCCCAATTGGGCCAATTCGTCCACCGCACTTGTATCATCAAATGGGGAGTGGTGAAAGGGAGATGGTGTCTCTGTATGAACAAGGTTTGGTCAATCCATCTTCATCCAGCATGGCTAATACTGATACTAATAGCAGTGGTGTTTCTCAGCATGATTGGCCTATGAGTTTCATCAATAACAATAACAATAATGCTAGTAATAGAGCCTCTGATGCCTCTTTGTGGAGCACCATCAGCACCACTGTTGGTGGTAACGCTGAGAGGACTAGTCCTAGTGGTGTTGGTGCTGGTTCTTCTTCTTTCGTCAAAAATCAATGGCCTAATCTTCCAGGGTATGGCCCTCCACCGTGA 942 0.4682 MEQGVEEGGGMNKIPRDSRVKEIRQGDAQIQVQAPQQPQKCPRCDSLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRAKSSNSSSSENMNSSSRSLPQQQQQPQGVVVQTQAPPLTTVVKAKDPSSVVASTFYQSGGYLSSLAAMHSLNSSSHPFDHSLNFAGSDTLRSSNLGLLSGFNVQRPIGPIRPPHLYHQMGSGEREMVSLYEQGLVNPSSSSMANTDTNSSGVSQHDWPMSFINNNNNNASNRASDASLWSTISTTVGGNAERTSPSGVGAGSSSFVKNQWPNLPGYGPPP 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00718 313 MobiDBLite consensus disorder prediction 83 123 - -
Gma15g00718 313 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 14 312 IPR045174 GO:0003700|GO:0006355
Gma15g00718 313 MobiDBLite consensus disorder prediction 93 123 - -
Gma15g00718 313 ProSitePatterns Zinc finger Dof-type signature. 41 77 IPR003851 GO:0003677|GO:0006355
Gma15g00718 313 MobiDBLite consensus disorder prediction 280 303 - -
Gma15g00718 313 Pfam Dof domain, zinc finger 37 93 IPR003851 GO:0003677|GO:0006355
Gma15g00718 313 ProSiteProfiles Zinc finger Dof-type profile. 39 93 IPR003851 GO:0003677|GO:0006355
Gma15g00718 313 MobiDBLite consensus disorder prediction 280 313 - -
Gma15g00718 313 PANTHER DOF ZINC FINGER PROTEIN DOF5.4-LIKE ISOFORM X1 14 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00718 Gma-Chr15 5898779 5899989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00718 12 101 C2C2-Dof Transcription Factor Family AT5G60200 63.333 6.63e-36 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gma15g00718 zf-Dof 1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00718 - - gmx:100817065 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00718 15 5898779 5899989 Gma15g00718 15 5898779 5899989 ECH
Gma15g00718 15 5898779 5899989 Gma13g02109 13 36213093 36214240 GST
Gma07g01933 07 40568300 40569166 Gma15g00718 15 5898779 5899989 PCT
Gma15g00718 15 5898779 5899989 Gma07g01933 07 40568300 40569166 PCT