Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00655 ATGGGTAACATGAAGTTGGAGTTGCATGTTGGAGTTTTTGTCATCTGCATGGTGATTCTCATAGGGAGTTTCTGTGTTGGAGATACTGACATGGTTGATGTTGCAGCAATAAATAGTCTATATGTTTCTCTGGCGTCACCACCACTTCAAGGGTGGAAACCCGTGGGAGGAGATCCATGTTTGGAGCTGTGGCAAGGTGTGGCTTGTGTCTTCTCCAACATAACTGCAATACACCTCGGAGGCATGAATTTGGGTGGACAGCTGGGCAGCAATTTGAATTTCCCATCCATTATAGAATTGGATCTTAGCAACAACCACATTGAAGGGCCTATTCCATTTACTTTTCCCCCTACTCTGAGGAGCTTGTCTCTCTCAGCAAATCAGTTAAATGGAAGCATTCCAGATGCCTTGTCCTTATTAACTCAATTGTCAAACTTGGACTTGTCAAATAACAACTTGAGTGGTCAGCTACCTTCATCAACAGGGAGTTTATCATCTCTTACCACATTACACTTGCAAAACAATCAACTTTCTGGGACCCTTTATGTTTTGCAAGACCTTCCTCTCCAAGATCTGAATATAGAGAACAATTTATTCTCTGGGCCAATTCCTCCAAAATTGCTGACTATCCCTAATTTCAGTAAAAATGGGAATCCATTTAATACTACTATTATTCCATCACCTCCTGCTGTGGCCCCTGCACCTGTAGCTATAGGTTCATCCCCCCAAGAATCGCCTTGGAAAGTGGCACATGGTCCTTCTGCCCTGACAGCACCAGTGCCTGCAAGTACTAGGAAGTCTGTTATAGCTAAGAGCGTCATTTGGATTGCTGGTGCAGGTCTTTTAGTATTTATTATATTGGGAGTTTTTCTTTTAATGTTGAGGTGCATTAAGAGAAGGCCGGAGAAGAAAAATGCAAATAAACTTGATGTGGGTGTGTTTGTGGGACCTTTGAATAAACCTACACGCAGTGACTCTGATGTTGAAGCAGCTAATCAAGAGGAGAAAGGTAAATTTGAAGTACCAAATAGAAGTACAGATTTCATTCCAAAGGTTCAGGAAGAACAAGACATATATTGGAAAGTAGTATCTGCAACATCAGAAGGCAATAATGGTCGTGAATCAATCAACACTGGAGGGGGTTCCAAACTTTCATCCCTGCAGCCACCACCACAACACTTTCTCCCAACCAGTCCTGGTGAGAAGGTCATTATTAATCCGGCTATAACTACACAAGTAACCAAAAGACAAGTCATGTCAAATTCCATCAGAGTTTATACTGTTGCGTTGCttcaacaatatacaaatagcttttcccaagaaaactgtattggggaaggtacacttgggcctgtttatcgggctgagctccctggtggaaagCTATTGGCAGTGAGGAAATTGGATGCTACTGCTTCCATGGGTCAGAGTCATGAACAATTTCTTCAATTGGTGTCCAGCATCTCAAAAATTCAGCATGCAAATATTGCAAGGCTTGTAGGCTACTGTGCTGAGCATAGCCAACGACTACTTGTATATGAGTATTGCAGTAATGGGACTCTACATGATACACTGCATGGGTATGATAATCATTGTATCAAACTCCCATGGAATGCACGCATTCAGGTGGCACTTGGAGCTGCAAGAGCTTTAGAGTATCTGCATGAGAACTTTCAGCCACCTATTGTGCATCGAAATTTTAGGTCTGCTAATGTTCTTCTGAACGACAATTTGGAAGTGTGCATCTCTGATTGTGGATTAGGGCCATTACTCTCTTCTGGCTCTACTGGTCAGTTATCAGGACGCCTCCTTACAGCGTATGGTTACAGTGCTCCAGAATTTGAGTCTGGAAGTTATACGCAGCAAAGTGATGTCTTCAGTTTTGGTGTCGTAATGCTAGAACTTCTCACTGGACGAAAATCTTATGAAAAGTCACTGCCTCGTGGAGAGCAAGTTTTGGTCAGATGGGCAGTCCCTCAACTCCATGACATTGATGCATTGTCAAAAATGGTTGACCCCTGCTTAAAGGGAACCTATCCTATGAAGTCCTTGTCACGTTTTGCAGATATTGTTTCTTCATGTATACAGcgggaacCTGAATTCCGGCCGGCAATGTCGGAAATTGTTCAAGATCTCTTGCGAATAAAGTAA 2151 0.4059 MGNMKLELHVGVFVICMVILIGSFCVGDTDMVDVAAINSLYVSLASPPLQGWKPVGGDPCLELWQGVACVFSNITAIHLGGMNLGGQLGSNLNFPSIIELDLSNNHIEGPIPFTFPPTLRSLSLSANQLNGSIPDALSLLTQLSNLDLSNNNLSGQLPSSTGSLSSLTTLHLQNNQLSGTLYVLQDLPLQDLNIENNLFSGPIPPKLLTIPNFSKNGNPFNTTIIPSPPAVAPAPVAIGSSPQESPWKVAHGPSALTAPVPASTRKSVIAKSVIWIAGAGLLVFIILGVFLLMLRCIKRRPEKKNANKLDVGVFVGPLNKPTRSDSDVEAANQEEKGKFEVPNRSTDFIPKVQEEQDIYWKVVSATSEGNNGRESINTGGGSKLSSLQPPPQHFLPTSPGEKVIINPAITTQVTKRQVMSNSIRVYTVALLQQYTNSFSQENCIGEGTLGPVYRAELPGGKLLAVRKLDATASMGQSHEQFLQLVSSISKIQHANIARLVGYCAEHSQRLLVYEYCSNGTLHDTLHGYDNHCIKLPWNARIQVALGAARALEYLHENFQPPIVHRNFRSANVLLNDNLEVCISDCGLGPLLSSGSTGQLSGRLLTAYGYSAPEFESGSYTQQSDVFSFGVVMLELLTGRKSYEKSLPRGEQVLVRWAVPQLHDIDALSKMVDPCLKGTYPMKSLSRFADIVSSCIQREPEFRPAMSEIVQDLLRIK 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00655 716 Pfam Protein tyrosine and serine/threonine kinase 441 712 IPR001245 GO:0004672|GO:0006468
Gma15g00655 716 Gene3D Ribonuclease Inhibitor 33 229 IPR032675 -
Gma15g00655 716 MobiDBLite consensus disorder prediction 369 389 - -
Gma15g00655 716 Gene3D Transferase(Phosphotransferase) domain 1 516 716 - -
Gma15g00655 716 SUPERFAMILY L domain-like 33 209 - -
Gma15g00655 716 ProSiteProfiles Protein kinase domain profile. 438 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00655 716 PANTHER LEUCINE RICH REPEAT KINASE 2 140 715 - -
Gma15g00655 716 PANTHER LEUCINE RICH REPEAT KINASE 2 8 146 - -
Gma15g00655 716 PRINTS Leucine-rich repeat signature 143 156 - -
Gma15g00655 716 PRINTS Leucine-rich repeat signature 164 177 - -
Gma15g00655 716 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 8 146 - -
Gma15g00655 716 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 140 715 - -
Gma15g00655 716 Gene3D Phosphorylase Kinase; domain 1 402 515 - -
Gma15g00655 716 SUPERFAMILY Protein kinase-like (PK-like) 417 712 IPR011009 -
Gma15g00655 716 Pfam Leucine rich repeat 99 153 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00655 Gma-Chr15 5382717 5390189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00655 19 715 Strubbelig Receptor Gene Family AT4G03390 50.599 0.0 636
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Gma15g00655 PK_Tyr_Ser-Thr 1.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00655 - - gmx:100804771 1333.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00655 15 5382717 5390189 Gma13g02174 13 36760949 36767407 GST
Gma07g01860 07 39848851 39854760 Gma15g00655 15 5382717 5390189 PCT
Gma15g00655 15 5382717 5390189 Gma07g01860 07 39848851 39854760 PCT