LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma15g00655	ATGGGTAACATGAAGTTGGAGTTGCATGTTGGAGTTTTTGTCATCTGCATGGTGATTCTCATAGGGAGTTTCTGTGTTGGAGATACTGACATGGTTGATGTTGCAGCAATAAATAGTCTATATGTTTCTCTGGCGTCACCACCACTTCAAGGGTGGAAACCCGTGGGAGGAGATCCATGTTTGGAGCTGTGGCAAGGTGTGGCTTGTGTCTTCTCCAACATAACTGCAATACACCTCGGAGGCATGAATTTGGGTGGACAGCTGGGCAGCAATTTGAATTTCCCATCCATTATAGAATTGGATCTTAGCAACAACCACATTGAAGGGCCTATTCCATTTACTTTTCCCCCTACTCTGAGGAGCTTGTCTCTCTCAGCAAATCAGTTAAATGGAAGCATTCCAGATGCCTTGTCCTTATTAACTCAATTGTCAAACTTGGACTTGTCAAATAACAACTTGAGTGGTCAGCTACCTTCATCAACAGGGAGTTTATCATCTCTTACCACATTACACTTGCAAAACAATCAACTTTCTGGGACCCTTTATGTTTTGCAAGACCTTCCTCTCCAAGATCTGAATATAGAGAACAATTTATTCTCTGGGCCAATTCCTCCAAAATTGCTGACTATCCCTAATTTCAGTAAAAATGGGAATCCATTTAATACTACTATTATTCCATCACCTCCTGCTGTGGCCCCTGCACCTGTAGCTATAGGTTCATCCCCCCAAGAATCGCCTTGGAAAGTGGCACATGGTCCTTCTGCCCTGACAGCACCAGTGCCTGCAAGTACTAGGAAGTCTGTTATAGCTAAGAGCGTCATTTGGATTGCTGGTGCAGGTCTTTTAGTATTTATTATATTGGGAGTTTTTCTTTTAATGTTGAGGTGCATTAAGAGAAGGCCGGAGAAGAAAAATGCAAATAAACTTGATGTGGGTGTGTTTGTGGGACCTTTGAATAAACCTACACGCAGTGACTCTGATGTTGAAGCAGCTAATCAAGAGGAGAAAGGTAAATTTGAAGTACCAAATAGAAGTACAGATTTCATTCCAAAGGTTCAGGAAGAACAAGACATATATTGGAAAGTAGTATCTGCAACATCAGAAGGCAATAATGGTCGTGAATCAATCAACACTGGAGGGGGTTCCAAACTTTCATCCCTGCAGCCACCACCACAACACTTTCTCCCAACCAGTCCTGGTGAGAAGGTCATTATTAATCCGGCTATAACTACACAAGTAACCAAAAGACAAGTCATGTCAAATTCCATCAGAGTTTATACTGTTGCGTTGCttcaacaatatacaaatagcttttcccaagaaaactgtattggggaaggtacacttgggcctgtttatcgggctgagctccctggtggaaagCTATTGGCAGTGAGGAAATTGGATGCTACTGCTTCCATGGGTCAGAGTCATGAACAATTTCTTCAATTGGTGTCCAGCATCTCAAAAATTCAGCATGCAAATATTGCAAGGCTTGTAGGCTACTGTGCTGAGCATAGCCAACGACTACTTGTATATGAGTATTGCAGTAATGGGACTCTACATGATACACTGCATGGGTATGATAATCATTGTATCAAACTCCCATGGAATGCACGCATTCAGGTGGCACTTGGAGCTGCAAGAGCTTTAGAGTATCTGCATGAGAACTTTCAGCCACCTATTGTGCATCGAAATTTTAGGTCTGCTAATGTTCTTCTGAACGACAATTTGGAAGTGTGCATCTCTGATTGTGGATTAGGGCCATTACTCTCTTCTGGCTCTACTGGTCAGTTATCAGGACGCCTCCTTACAGCGTATGGTTACAGTGCTCCAGAATTTGAGTCTGGAAGTTATACGCAGCAAAGTGATGTCTTCAGTTTTGGTGTCGTAATGCTAGAACTTCTCACTGGACGAAAATCTTATGAAAAGTCACTGCCTCGTGGAGAGCAAGTTTTGGTCAGATGGGCAGTCCCTCAACTCCATGACATTGATGCATTGTCAAAAATGGTTGACCCCTGCTTAAAGGGAACCTATCCTATGAAGTCCTTGTCACGTTTTGCAGATATTGTTTCTTCATGTATACAGcgggaacCTGAATTCCGGCCGGCAATGTCGGAAATTGTTCAAGATCTCTTGCGAATAAAGTAA	2151	0.4059	MGNMKLELHVGVFVICMVILIGSFCVGDTDMVDVAAINSLYVSLASPPLQGWKPVGGDPCLELWQGVACVFSNITAIHLGGMNLGGQLGSNLNFPSIIELDLSNNHIEGPIPFTFPPTLRSLSLSANQLNGSIPDALSLLTQLSNLDLSNNNLSGQLPSSTGSLSSLTTLHLQNNQLSGTLYVLQDLPLQDLNIENNLFSGPIPPKLLTIPNFSKNGNPFNTTIIPSPPAVAPAPVAIGSSPQESPWKVAHGPSALTAPVPASTRKSVIAKSVIWIAGAGLLVFIILGVFLLMLRCIKRRPEKKNANKLDVGVFVGPLNKPTRSDSDVEAANQEEKGKFEVPNRSTDFIPKVQEEQDIYWKVVSATSEGNNGRESINTGGGSKLSSLQPPPQHFLPTSPGEKVIINPAITTQVTKRQVMSNSIRVYTVALLQQYTNSFSQENCIGEGTLGPVYRAELPGGKLLAVRKLDATASMGQSHEQFLQLVSSISKIQHANIARLVGYCAEHSQRLLVYEYCSNGTLHDTLHGYDNHCIKLPWNARIQVALGAARALEYLHENFQPPIVHRNFRSANVLLNDNLEVCISDCGLGPLLSSGSTGQLSGRLLTAYGYSAPEFESGSYTQQSDVFSFGVVMLELLTGRKSYEKSLPRGEQVLVRWAVPQLHDIDALSKMVDPCLKGTYPMKSLSRFADIVSSCIQREPEFRPAMSEIVQDLLRIK	716

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Gma15g00655	716	Pfam	Protein tyrosine and serine/threonine kinase	441	712	IPR001245	GO:0004672\|GO:0006468
Gma15g00655	716	Gene3D	Ribonuclease Inhibitor	33	229	IPR032675	-
Gma15g00655	716	MobiDBLite	consensus disorder prediction	369	389	-	-
Gma15g00655	716	Gene3D	Transferase(Phosphotransferase) domain 1	516	716	-	-
Gma15g00655	716	SUPERFAMILY	L domain-like	33	209	-	-
Gma15g00655	716	ProSiteProfiles	Protein kinase domain profile.	438	713	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Gma15g00655	716	PANTHER	LEUCINE RICH REPEAT KINASE 2	140	715	-	-
Gma15g00655	716	PANTHER	LEUCINE RICH REPEAT KINASE 2	8	146	-	-
Gma15g00655	716	PRINTS	Leucine-rich repeat signature	143	156	-	-
Gma15g00655	716	PRINTS	Leucine-rich repeat signature	164	177	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma15g00655	Gma-Chr15	5382717	5390189	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma15g00655	19	715	Strubbelig Receptor Gene Family	AT4G03390	50.599	0.0	636

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-V	Gma15g00655		PK_Tyr_Ser-Thr	1.2e-40	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma15g00655	-		-	gmx:100804771	1333.93

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Event-related genes

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Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
Gma15g00655	15	5382717	5390189	Gma13g02174	13	36760949	36767407	GST
Gma07g01860	07	39848851	39854760	Gma15g00655	15	5382717	5390189	PCT
Gma15g00655	15	5382717	5390189	Gma07g01860	07	39848851	39854760	PCT

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