Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00641 ATGGCTTCGGCTTCGTCTTCGTCCTCCAAGCTATGCTTCAATTCCGACTGCAAAGAGTTGAAGTCCGAAAGACCTAAGAAAGGGTGGAGACTCCGCAGCGGAGAACTAGCCGAGCTTTGTGATCGATGCGGCTCTGCTTTTGAAGAAGGGAGGTTCTGTGAAATTTTTCACTCAAATGCTTCTGGTTGGAGGAGTTGTGAGACTTGTCGAAAGCGGATTCATTGTGGGTGTATTGTTTCAAGTCATGCTTTTATGTTGTTGGATCCCGGAGGAATTGAATGTTATGCATGTGCCCGCAAAAGTATTATTTTGCCATCTAACCTGCCTTGGCCACAGTCCTTTCCCCTTCAAAATCGTTTATCGGATAGACTTAGAGACCTATCTGGCAAAGGTTGGAGTCAGCTAGCTGGATCAGGTCCTGTACCATGGAAGCAAGCACCCAGTCTGTTCAATTCTGCTTCTTCATCTGACATGATCCCAGAAGTGCCTTCTTTAGTTGAACTATCCAATAGCTTTGACAAAATGTATTGCAATGAAAGGTTACCTGTCTCAGCCTTGGAAAAGAAAAATGAGGACTTGTCTGGAATGTCAGTTAATTGGAACATCAAGCTTGGCTCGCGGGAGATGATGCTTATGAATGGAATGAGGAATGAGGATAAATCAAGTTCATGTTTAAATATGTGTCAACAGCCTTCTTCTCTGAAGGAAGAGTCATCTCCTCAACCATTTGGTTTGCCTGTGCCTAATTCATGCCAAAATGAAAGAAATGGTAAACTTGGGGTAACTGGAAGTCATCCACAACAAACTCCACCTCCAGGAAAGCAATTTAATGGCACTATGCATTTAGCACCTGATTCATCAGGTGAGGCTCAGGTTCGCAATGGGCGGCCTCGAGCAGATGCCCGAGGAAGAAATCAGTTATTGCCACGGTACTGGCCAAGGTGTACAGATCTGGAGCTACAGCAAATTTCTATTGATTCAAATTCTGTAATTACTCCCTTGTTTCAGAAAACCTTGAGTGCTAGTGATGCTGGGCGAATTGGGCGTTTAGTGCTACCCAAGAAGTGTGCTGAGACCTACTTCCCACCAATTTCTCAGCCTGAAGGATTGCCACTTAAAATCCTTGATGCAAAAGGCAAGGAATGGATATTTCAATTTCGCTTCTGGCCAAACAATAACAGCAGAATGTATGTTTTAGAGGGTGTCACTCCATGCATACAGTCCATGCAGTTGCAGGCTGGTGATACTGTAACATTTAGCCGGTTGGAGCCAGAGGGAAGGTTGGTTATGGGATTTAGAAAGGCTTCAAGTGCTGTGCCATCCGATCAGGACAATGAGACCAAGACTGGAAATGGATTTTCTGCACATGGTGAAGTTGAATTGGCTGATCCTAATTCATGGTCTAAAGTTGATAAGTCAGGATACATAGCAAAAGAAGCACTGGGGAGCAAATCATTAATCTCTAGAAAAAGAAAGAGCAACATATTGGGCTCAAAGAGTAAACGTCTGAGAATTGAAAATGAGGATTTAATAGAGCTGAAGATTACATGGCAAGAAGCTCAAGGTCTGCTCCGGCCCCCTCCTAGCCACATTCCAAGCATTGTGGTGATTGAAGGTTTTGAATTTGAGGAATATGAGGAAGCTCCAGTGCTTGGGAAGCCAACAATTTTTACCAGTGATAGTGTGGGTGAAAAGATCCAGTGGGCTCAATGTGAAGATTGTTTCAAGTGGCGCAAATTGCCAGCAAGTGCGCTTCTTCCATCAAAATGGACGTGTTCTGATAATTCGTGGGATCCAGAAAGATCTTCTTGTTCAGCTGCGCAAGAGCTGACAGCAGAGCAACTTGAGAATTTGCTACCTCCTTGTAGTTCAGCTGTTCCCAAGAAAATGAAGGCTGCCAAACAGGATCCTGATAATGCTGAAGCTTTGGAGGGACTTGACACCCTTGCAAATCTAGCTATCCTGGGAGAGGGTGAGGCACTCCCAGCATCCGCGCAGGCCACAACTAAGCATCCACGTCACAGACCTGGCTGCTCTTGCATCGTTTGCATTCAACCTCCCAGTGGAAAGGGCCCCAAGCATAAGCAGACATGCACATGTAATGTATGCTTAACAGTGAAGCGACGTTTCCGTACCCTTATGTTACGGCGTGAGAAGAAACAATCAGAAAAAGAAGCAGAGACAACTCGTAAAAAGCAACAGCAACAACATCCTCAACCGTTACCTTCATCTGAAATTTTGCTTGATGAAGATTCCTTGCCCTGTAGTAACACAGGTGATAGTAGCCCAAACCAGAACAAAGAGGGTAATGATGGTTCTGATGATGATCCTAACCGAATAAAATCATCAGCTTTGCCATTCAAAGGTCAAATTGACCTCAATATCCAGCCAGAGCGAGAAGAAGAACTATCTCCTGGTTCAGATTCTGGCGGCATGATGAAGTTGCTCCATGATGCTACTGAGCGGTATCTCAAACAGCAGACTGTGAACTCTGGTACTGGAGATTCATCAGGCAGTCAATCACGGCTGGTAGGAGATGCAATGAGGGAAGATAAACTTAGCAATGGTGTTGCCCATGGCAGTGGTAGTCATAATACTGATAAGGAACATGCCCAATCTTTGTCTATGAATGTGTGA 2637 0.4475 MASASSSSSKLCFNSDCKELKSERPKKGWRLRSGELAELCDRCGSAFEEGRFCEIFHSNASGWRSCETCRKRIHCGCIVSSHAFMLLDPGGIECYACARKSIILPSNLPWPQSFPLQNRLSDRLRDLSGKGWSQLAGSGPVPWKQAPSLFNSASSSDMIPEVPSLVELSNSFDKMYCNERLPVSALEKKNEDLSGMSVNWNIKLGSREMMLMNGMRNEDKSSSCLNMCQQPSSLKEESSPQPFGLPVPNSCQNERNGKLGVTGSHPQQTPPPGKQFNGTMHLAPDSSGEAQVRNGRPRADARGRNQLLPRYWPRCTDLELQQISIDSNSVITPLFQKTLSASDAGRIGRLVLPKKCAETYFPPISQPEGLPLKILDAKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLEPEGRLVMGFRKASSAVPSDQDNETKTGNGFSAHGEVELADPNSWSKVDKSGYIAKEALGSKSLISRKRKSNILGSKSKRLRIENEDLIELKITWQEAQGLLRPPPSHIPSIVVIEGFEFEEYEEAPVLGKPTIFTSDSVGEKIQWAQCEDCFKWRKLPASALLPSKWTCSDNSWDPERSSCSAAQELTAEQLENLLPPCSSAVPKKMKAAKQDPDNAEALEGLDTLANLAILGEGEALPASAQATTKHPRHRPGCSCIVCIQPPSGKGPKHKQTCTCNVCLTVKRRFRTLMLRREKKQSEKEAETTRKKQQQQHPQPLPSSEILLDEDSLPCSNTGDSSPNQNKEGNDGSDDDPNRIKSSALPFKGQIDLNIQPEREEELSPGSDSGGMMKLLHDATERYLKQQTVNSGTGDSSGSQSRLVGDAMREDKLSNGVAHGSGSHNTDKEHAQSLSMNV 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00641 878 MobiDBLite consensus disorder prediction 823 843 - -
Gma15g00641 878 MobiDBLite consensus disorder prediction 252 277 - -
Gma15g00641 878 Gene3D - 566 619 - -
Gma15g00641 878 MobiDBLite consensus disorder prediction 716 878 - -
Gma15g00641 878 MobiDBLite consensus disorder prediction 750 768 - -
Gma15g00641 878 MobiDBLite consensus disorder prediction 858 878 - -
Gma15g00641 878 Coils Coil 716 736 - -
Gma15g00641 878 MobiDBLite consensus disorder prediction 716 732 - -
Gma15g00641 878 Pfam CW-type Zinc Finger 567 609 IPR011124 GO:0008270
Gma15g00641 878 Pfam B3 DNA binding domain 335 434 IPR003340 GO:0003677
Gma15g00641 878 MobiDBLite consensus disorder prediction 438 452 - -
Gma15g00641 878 Gene3D - 313 439 IPR015300 -
Gma15g00641 878 ProSiteProfiles B3 DNA-binding domain profile. 335 436 IPR003340 GO:0003677
Gma15g00641 878 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 7 810 - -
Gma15g00641 878 MobiDBLite consensus disorder prediction 435 458 - -
Gma15g00641 878 SUPERFAMILY DNA-binding pseudobarrel domain 332 434 IPR015300 -
Gma15g00641 878 ProSiteProfiles Zinc finger CW-type profile. 562 612 IPR011124 GO:0008270
Gma15g00641 878 CDD B3_DNA 333 434 IPR003340 GO:0003677
Gma15g00641 878 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300-LIKE ISOFORM X1 7 810 - -
Gma15g00641 878 SMART B3_2 335 436 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00641 Gma-Chr15 5255486 5265679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00641 267 720 B3 DNA Binding Superfamily AT4G32010 57.205 3.53e-166 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Gma15g00641 B3 1.2e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00641 - - gmx:100807252 1759.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00641 15 5255486 5265679 Gma13g02190 13 36896360 36906618 GST