LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma15g00635	ATGTCGAGTATCACTTTCTTCCAGCATCTCTCTAGAGCTTTCCGTGATAACCAGTCGCATCTTAAGCTTGTACTGCTCTGCACCGCCGTAAGTGGTGGTGGTCTTTGGGCTTATGGTGAGAGTGTTGCCCCAGAAGAGGCAGTTAGCGAGAAGAAGAAGGTGGTGGTGCTGGGAACTGGTTGGGCGGCCACAAGTTTTATGAAGAATTTGAAGAATCCAAAATATGAGGTTCAAGTAGTATCGCCTCGTAACTACTTTGCATTCACTCCTTTGCTGCCTAGCGTTACGTGCGGGACCGTCGAAGCGCGCAGCATTGTTGAGCCAGTTCGCAATATTTTTAAGCAGAAAAAGGTGGACGTACAATTCAGTGAAGCAGAATGTTTCAAGATTGATGCAGAAAATAGGAAAGTTTACTGTCGATCTAGTGTGAACAATAATTTGAATGGGAAAGAAGAATTTGTTGTGGATTATGACTACCTAATAGTTGCGGTGGGTGCTAATGTCAATACATTTAATACTCCAGGAGTGACGGAGAATTGCCATTTCTTGAAGGAAGTTGAAGATGCTAAAAAAATTAGAAGAACAGTTATTGACTGCTTCGAGAGAGCAAATTTGCCCGATGTAAGTGAAGATGAGAAGAAGAGAATTCTTCATTTTGCTATTGTTGGAGGTGGACCTACTGGAGTAGAGTTTGCAGCCTCACTTCATGATTTTGTCAATGAGGATTTGCTCCGTTTATATCCTGGGATTAAAGATTTAGTTAAAATTACACTTCTGGAGGCCGGAGATCATATCTTGGGCATGTTTGACAAGAGAATTACTACTTTTGCTGAAGACAAGTTTCGAAGAGACGGGATTGATGTGAAAACAGGATCCATGGTTGTTAAGGTATCCGAGAAAGAAATTTCCACTAAAGAACTGAAAAACGGAGGAGAGATTAAGACAATTCCGTATGGAATGGCTGTCTGGTCAACTGGTATTGGCACTCGTCCATTTATTAAAGATTTCATGGCACAAATCGGTCAGGCTAGCAGGCGTGCTCTAGCTACAGACGAGTGGTTGAGAGTTGAAGGGTGCAGCAATGTCTATGCGCTTGGTGACTGTGCCACGATAAACCAGCGGAAAGTCATGGAAGATATCGTGGCGATCTTTAAGAAGGCTGACAAAGAGAGTTCCGGAACACTTACGGTCAAACAATTTCAAGAGGTCATGAAAGATATCTGTGAAAGATACCCTCAGGTTGAGCTATATCTGAAGAATAAACAGATGCACAACATTGCTGATTTATTGAAGGAAGCCAAGGGAGATGATAAAAAAGAATCAATTGAACTGAATATTGAAGAACTCAAAACTGCACTTTCCAAAGTGGATTCTCAAATGAAATTTCTTCCTGCTACAGCACAGGTTGCATCTCAGCAAGGCACTTACCTGGCCAAGTGTTTTAATCGGATGGAAGAGTGTGAAAAAAATCCTGAGGGTCCTCTCAGGTTCAGGGGAGAAGGTCACCATCGGTTCAAACCCTTTAGGTACAAGCATTTAGGTCAATTTGCTCCTTTGGGAGGAGAGCAGACAGCTGCCCAGCTTCCTGGAGATTGGGTTTCAATTGGCCATAGCAGTCAATGGCTGTGGTATTCTGTCTATGCAAGCAAGCAAGTAAGCTGGCGTACTAGAGCGTTAGTAGTTTCAGACTGGACAAGACGTTTTATTTTTGGAAGGGACTCAAGTAGCATCTGA	1734	0.4291	MSSITFFQHLSRAFRDNQSHLKLVLLCTAVSGGGLWAYGESVAPEEAVSEKKKVVVLGTGWAATSFMKNLKNPKYEVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIFKQKKVDVQFSEAECFKIDAENRKVYCRSSVNNNLNGKEEFVVDYDYLIVAVGANVNTFNTPGVTENCHFLKEVEDAKKIRRTVIDCFERANLPDVSEDEKKRILHFAIVGGGPTGVEFAASLHDFVNEDLLRLYPGIKDLVKITLLEAGDHILGMFDKRITTFAEDKFRRDGIDVKTGSMVVKVSEKEISTKELKNGGEIKTIPYGMAVWSTGIGTRPFIKDFMAQIGQASRRALATDEWLRVEGCSNVYALGDCATINQRKVMEDIVAIFKKADKESSGTLTVKQFQEVMKDICERYPQVELYLKNKQMHNIADLLKEAKGDDKKESIELNIEELKTALSKVDSQMKFLPATAQVASQQGTYLAKCFNRMEECEKNPEGPLRFRGEGHHRFKPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTRALVVSDWTRRFIFGRDSSSI	577

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Gma15g00635	577	Coils	Coil	439	459	-	-
Gma15g00635	577	PRINTS	FAD-dependent pyridine nucleotide reductase signature	28	47	-	-
Gma15g00635	577	PRINTS	FAD-dependent pyridine nucleotide reductase signature	157	175	-	-
Gma15g00635	577	PRINTS	FAD-dependent pyridine nucleotide reductase signature	218	236	-	-
Gma15g00635	577	ProSiteProfiles	EF-hand calcium-binding domain profile.	375	410	IPR002048	GO:0005509
Gma15g00635	577	SUPERFAMILY	EF-hand	368	464	IPR011992	-
Gma15g00635	577	PANTHER	NAD(P)H DEHYDROGENASE B2	3	577	-	-
Gma15g00635	577	SUPERFAMILY	FAD/NAD(P)-binding domain	51	270	IPR036188	-
Gma15g00635	577	PANTHER	NADH DEHYDROGENASE	3	577	IPR045024	GO:0003954\|GO:0006116
Gma15g00635	577	SUPERFAMILY	FAD/NAD(P)-binding domain	218	372	IPR036188	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma15g00635	Gma-Chr15	5203986	5208629	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma15g00635	1	577	Chloroplast and Mitochondria Gene Families	AT4G21490	72.727	0.0	865

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma15g00635	K03885		-	gmx:100802661	1151.35

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Event-related genes

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Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
Gma15g00635	15	5203986	5208629	Gma13g02196	13	36948509	36953862	GST
Gma07g01841	07	39646080	39651534	Gma15g00635	15	5203986	5208629	PCT
Gma08g00566	08	4620485	4626845	Gma15g00635	15	5203986	5208629	PCT
Gma15g00635	15	5203986	5208629	Gma07g01841	07	39646080	39651534	PCT
Gma15g00635	15	5203986	5208629	Gma08g00566	08	4620485	4626845	PCT

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