Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00635 ATGTCGAGTATCACTTTCTTCCAGCATCTCTCTAGAGCTTTCCGTGATAACCAGTCGCATCTTAAGCTTGTACTGCTCTGCACCGCCGTAAGTGGTGGTGGTCTTTGGGCTTATGGTGAGAGTGTTGCCCCAGAAGAGGCAGTTAGCGAGAAGAAGAAGGTGGTGGTGCTGGGAACTGGTTGGGCGGCCACAAGTTTTATGAAGAATTTGAAGAATCCAAAATATGAGGTTCAAGTAGTATCGCCTCGTAACTACTTTGCATTCACTCCTTTGCTGCCTAGCGTTACGTGCGGGACCGTCGAAGCGCGCAGCATTGTTGAGCCAGTTCGCAATATTTTTAAGCAGAAAAAGGTGGACGTACAATTCAGTGAAGCAGAATGTTTCAAGATTGATGCAGAAAATAGGAAAGTTTACTGTCGATCTAGTGTGAACAATAATTTGAATGGGAAAGAAGAATTTGTTGTGGATTATGACTACCTAATAGTTGCGGTGGGTGCTAATGTCAATACATTTAATACTCCAGGAGTGACGGAGAATTGCCATTTCTTGAAGGAAGTTGAAGATGCTAAAAAAATTAGAAGAACAGTTATTGACTGCTTCGAGAGAGCAAATTTGCCCGATGTAAGTGAAGATGAGAAGAAGAGAATTCTTCATTTTGCTATTGTTGGAGGTGGACCTACTGGAGTAGAGTTTGCAGCCTCACTTCATGATTTTGTCAATGAGGATTTGCTCCGTTTATATCCTGGGATTAAAGATTTAGTTAAAATTACACTTCTGGAGGCCGGAGATCATATCTTGGGCATGTTTGACAAGAGAATTACTACTTTTGCTGAAGACAAGTTTCGAAGAGACGGGATTGATGTGAAAACAGGATCCATGGTTGTTAAGGTATCCGAGAAAGAAATTTCCACTAAAGAACTGAAAAACGGAGGAGAGATTAAGACAATTCCGTATGGAATGGCTGTCTGGTCAACTGGTATTGGCACTCGTCCATTTATTAAAGATTTCATGGCACAAATCGGTCAGGCTAGCAGGCGTGCTCTAGCTACAGACGAGTGGTTGAGAGTTGAAGGGTGCAGCAATGTCTATGCGCTTGGTGACTGTGCCACGATAAACCAGCGGAAAGTCATGGAAGATATCGTGGCGATCTTTAAGAAGGCTGACAAAGAGAGTTCCGGAACACTTACGGTCAAACAATTTCAAGAGGTCATGAAAGATATCTGTGAAAGATACCCTCAGGTTGAGCTATATCTGAAGAATAAACAGATGCACAACATTGCTGATTTATTGAAGGAAGCCAAGGGAGATGATAAAAAAGAATCAATTGAACTGAATATTGAAGAACTCAAAACTGCACTTTCCAAAGTGGATTCTCAAATGAAATTTCTTCCTGCTACAGCACAGGTTGCATCTCAGCAAGGCACTTACCTGGCCAAGTGTTTTAATCGGATGGAAGAGTGTGAAAAAAATCCTGAGGGTCCTCTCAGGTTCAGGGGAGAAGGTCACCATCGGTTCAAACCCTTTAGGTACAAGCATTTAGGTCAATTTGCTCCTTTGGGAGGAGAGCAGACAGCTGCCCAGCTTCCTGGAGATTGGGTTTCAATTGGCCATAGCAGTCAATGGCTGTGGTATTCTGTCTATGCAAGCAAGCAAGTAAGCTGGCGTACTAGAGCGTTAGTAGTTTCAGACTGGACAAGACGTTTTATTTTTGGAAGGGACTCAAGTAGCATCTGA 1734 0.4291 MSSITFFQHLSRAFRDNQSHLKLVLLCTAVSGGGLWAYGESVAPEEAVSEKKKVVVLGTGWAATSFMKNLKNPKYEVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIFKQKKVDVQFSEAECFKIDAENRKVYCRSSVNNNLNGKEEFVVDYDYLIVAVGANVNTFNTPGVTENCHFLKEVEDAKKIRRTVIDCFERANLPDVSEDEKKRILHFAIVGGGPTGVEFAASLHDFVNEDLLRLYPGIKDLVKITLLEAGDHILGMFDKRITTFAEDKFRRDGIDVKTGSMVVKVSEKEISTKELKNGGEIKTIPYGMAVWSTGIGTRPFIKDFMAQIGQASRRALATDEWLRVEGCSNVYALGDCATINQRKVMEDIVAIFKKADKESSGTLTVKQFQEVMKDICERYPQVELYLKNKQMHNIADLLKEAKGDDKKESIELNIEELKTALSKVDSQMKFLPATAQVASQQGTYLAKCFNRMEECEKNPEGPLRFRGEGHHRFKPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTRALVVSDWTRRFIFGRDSSSI 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00635 577 Coils Coil 439 459 - -
Gma15g00635 577 PRINTS FAD-dependent pyridine nucleotide reductase signature 28 47 - -
Gma15g00635 577 PRINTS FAD-dependent pyridine nucleotide reductase signature 157 175 - -
Gma15g00635 577 PRINTS FAD-dependent pyridine nucleotide reductase signature 218 236 - -
Gma15g00635 577 ProSiteProfiles EF-hand calcium-binding domain profile. 375 410 IPR002048 GO:0005509
Gma15g00635 577 SUPERFAMILY EF-hand 368 464 IPR011992 -
Gma15g00635 577 PANTHER NAD(P)H DEHYDROGENASE B2 3 577 - -
Gma15g00635 577 SUPERFAMILY FAD/NAD(P)-binding domain 51 270 IPR036188 -
Gma15g00635 577 PANTHER NADH DEHYDROGENASE 3 577 IPR045024 GO:0003954|GO:0006116
Gma15g00635 577 SUPERFAMILY FAD/NAD(P)-binding domain 218 372 IPR036188 -
Gma15g00635 577 Pfam Pyridine nucleotide-disulphide oxidoreductase 52 380 IPR023753 GO:0016491
Gma15g00635 577 Gene3D - 42 422 - -
Gma15g00635 577 Gene3D - 423 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00635 Gma-Chr15 5203986 5208629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00635 1 577 Chloroplast and Mitochondria Gene Families AT4G21490 72.727 0.0 865
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00635 K03885 - gmx:100802661 1151.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00635 15 5203986 5208629 Gma13g02196 13 36948509 36953862 GST
Gma07g01841 07 39646080 39651534 Gma15g00635 15 5203986 5208629 PCT
Gma08g00566 08 4620485 4626845 Gma15g00635 15 5203986 5208629 PCT
Gma15g00635 15 5203986 5208629 Gma07g01841 07 39646080 39651534 PCT
Gma15g00635 15 5203986 5208629 Gma08g00566 08 4620485 4626845 PCT