Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00634 ATGGGTGACGAACAACCGTCGACAACCTCAGTCTCCGGTCTCCGGCGAGTAATCGCGCTCCTCTCTTCATTGATCTCCCTCTCCCTCTCGATCAGAGTCTTCGCCGGAAAGTGGCAACTGATTCGGAGCAGGCTGGAGGAGCTCCACTCGGCCCTCGTTGCCGGCGATTCCACGTCACTCTCCGGCGAGCTCCCGGCAATAACGGGCACGGCGGAGGAGTGCCTCGAGCTGGCGCGGCGGTGCGCGGATCTGTCCTACAGCGGGAAGCTTCTGATGCAGAGCGATTTGGACTTGACATTGGGAAAGTTGGAAGCTCACGTGAAGAAGCTATCTGAGATATTCAAGAAGGGCGTGTCGATGCATGGCTACTCCGTAGTAGTTTCAAGGCCTGGTTTTGGAGCTTGCAAAGATGACATGAGGTTCTACTTAAGGGACTTATTGACTCGAATGAAGGTTGGTGATTTGGGTATGAAGAAGCAAGCATTGGTGAACTTGCATGAGGTGGTTGTGGAGGATGACAAGTATGTGAAGTTGGTTGTTGAGGTTTCTGAGTTTGTTCACGTGTTGGTGGATTTTCTAGGTTCTAACGAGGTTGAGGTTGTCGAGGAGGCTGCTAAGGTTGTTTCTTTGGTTGCAGGGTTTGATTCTTATAAAGGGGTTTTGGTTGGTGCTGGGGTTATCGCCCCTTTGATTCGGGTTTTGGAATGTGGGAGTGAGGTTGGGAAGGTTGGTGCTGCGAGGTGCTTGCAAAGGTTGACCGAGAATTCGGATAATGCGTGGTGTGTATCTGCTCATGGGGGTGTTACTGCTTTGTTGAGGATTTGTGAGAGTGTGGAAGAGTGTAAAGGGGAATTGGTTGGTCCTGCTTGTGGGGTGTTGAGGAATCTTTGTGGTGTTGAGGAAATCAAGAGGTTTATGGTTGAGGAGGGTGTGGTTTCCACGTTTGTGAGTCTTGTGAGGTCTAAGGATGAAGCAGTTCAGGTGAGTTCTGTTGAGTTGATTCAGAACATTGCCTCTGGTGATGAGTTGGTTAGGCAGATGGTGATTAAAGAAGGAGGGATTCGTGTTCTTTTGCGTGTTTTGGATCCTAAGTGGTCTTGTTCGTCAAAAACAAGAGAGGTTGTGATGAGGGTTATTGATAATTTGTGTTTTTCTTCGCGTAGTTGTGTTAGTGTTTTGCTGAGTTATGGCTTTGTGGATCAATTGATGTATTATGTGAGAAATGGGGAGGCTTTGATTCAGGAGTTGGCACTGAAGGTGGCGTTTAGATTCTGTGAAACATCGGAGGAGGCTAAGAAGGCGTTGGGTGATGCCTGCTTCATGGCTGAGCTTGTGAAGTTTCTGAATGCGAAATCGTTTGAAGTTCGGGAAATGGCAGCAGAGGCACTCTCTAGCATGGTTATGGTGGCGAAAAATAGGAAGAGGTTTGTGCAGGATGACCGAAACATTTCTCTTCTTCTGCAATTGCTGGATCCAGGGGAGGGCAATTCAGGTAATAAAAAGTTGTTGATCTCTATCTTGATGTCACTAACAAGTTGCAACAGTGGGAGGAAAAAAATTGTGAGTTCCGGGTATGCTAAAAACATAGAGAGGCTTGCAGAAGCTGAGGTTTCTTCTGATGCCAAGAGGCTTGTGAGGAAGCTATCCACAAACCGATTCCGCAGTATGTTGAGTGGAATCTGGCACTCTTGA 1692 0.4811 MGDEQPSTTSVSGLRRVIALLSSLISLSLSIRVFAGKWQLIRSRLEELHSALVAGDSTSLSGELPAITGTAEECLELARRCADLSYSGKLLMQSDLDLTLGKLEAHVKKLSEIFKKGVSMHGYSVVVSRPGFGACKDDMRFYLRDLLTRMKVGDLGMKKQALVNLHEVVVEDDKYVKLVVEVSEFVHVLVDFLGSNEVEVVEEAAKVVSLVAGFDSYKGVLVGAGVIAPLIRVLECGSEVGKVGAARCLQRLTENSDNAWCVSAHGGVTALLRICESVEECKGELVGPACGVLRNLCGVEEIKRFMVEEGVVSTFVSLVRSKDEAVQVSSVELIQNIASGDELVRQMVIKEGGIRVLLRVLDPKWSCSSKTREVVMRVIDNLCFSSRSCVSVLLSYGFVDQLMYYVRNGEALIQELALKVAFRFCETSEEAKKALGDACFMAELVKFLNAKSFEVREMAAEALSSMVMVAKNRKRFVQDDRNISLLLQLLDPGEGNSGNKKLLISILMSLTSCNSGRKKIVSSGYAKNIERLAEAEVSSDAKRLVRKLSTNRFRSMLSGIWHS 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00634 563 SUPERFAMILY ARM repeat 144 545 IPR016024 -
Gma15g00634 563 SMART arm_5 255 298 IPR000225 GO:0005515
Gma15g00634 563 SMART arm_5 299 339 IPR000225 GO:0005515
Gma15g00634 563 SMART arm_5 172 213 IPR000225 GO:0005515
Gma15g00634 563 SMART arm_5 428 468 IPR000225 GO:0005515
Gma15g00634 563 SMART arm_5 214 254 IPR000225 GO:0005515
Gma15g00634 563 SMART arm_5 341 384 IPR000225 GO:0005515
Gma15g00634 563 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 310 353 IPR000225 GO:0005515
Gma15g00634 563 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 5 563 - -
Gma15g00634 563 Gene3D - 143 552 IPR011989 -
Gma15g00634 563 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 5 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00634 Gma-Chr15 5192366 5194057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00634 124 417 U-box Gene Family AT2G23140 25.000 3.61e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00634 - - gmx:100788707 1038.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00634 15 5192366 5194057 Gma13g02197 13 36962148 36963995 GST
Gma07g01839 07 39613845 39615982 Gma15g00634 15 5192366 5194057 PCT
Gma08g00568 08 4656167 4658049 Gma15g00634 15 5192366 5194057 PCT
Gma15g00634 15 5192366 5194057 Gma07g01839 07 39613845 39615982 PCT
Gma15g00634 15 5192366 5194057 Gma08g00568 08 4656167 4658049 PCT