Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00621 ATGAGGAAGTGTGAACTCTGTAATAGTCCCGCAAAGTTGTTCTGTGAATCAGATCAAGCCAGCCTCTGTTGGGAATGCGATGCTAAGGTTCACAGTGCAAACTTCCTCGTCACCAAACATCCCAGGATTCTTCTCTGCCATGTTTGTCAATCACTAACGGCCTGGCACGGCACGGGACCCAAGTTTGTACCCACCATGTCCGTTTGCAACACTTGTGTCAACAACAATAGTGAGACCTGCAGCCAACAGAATCATGTTGAGGACCACGACGACAATCATGATGATGGCACGGGAGAGGATCATGTAGAAAACCATGATGGTGGTGTGTCTGAAGATGATGAAGAAAATCAAGTTGTTCCATGGACATCTACACCACCACCCCCAGCTTCCACTTCTTCAAATAGTGTTACAACTAGTTCTACCAGGTTCTCTAATGTTGAAGAAGGTGGCTCCGATTAA 459 0.4662 MRKCELCNSPAKLFCESDQASLCWECDAKVHSANFLVTKHPRILLCHVCQSLTAWHGTGPKFVPTMSVCNTCVNNNSETCSQQNHVEDHDDNHDDGTGEDHVENHDGGVSEDDEENQVVPWTSTPPPPASTSSNSVTTSSTRFSNVEEGGSD 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00621 152 MobiDBLite consensus disorder prediction 83 112 - -
Gma15g00621 152 Pfam B-box zinc finger 2 43 IPR000315 GO:0008270
Gma15g00621 152 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 144 - -
Gma15g00621 152 MobiDBLite consensus disorder prediction 82 152 - -
Gma15g00621 152 CDD Bbox1_BBX-like 3 45 - -
Gma15g00621 152 SMART bboxneu5 1 45 IPR000315 GO:0008270
Gma15g00621 152 MobiDBLite consensus disorder prediction 128 152 - -
Gma15g00621 152 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Gma15g00621 152 PANTHER B-BOX TYPE ZINC FINGER PROTEIN 1 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00621 Gma-Chr15 5098944 5100213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00621 2 95 C2C2-CO-like Transcription Factor Family AT4G27310 52.128 6.06e-32 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma15g00621 zf-B_box 4.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00621 - - gmx:100805832 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00621 15 5098944 5100213 Gma13g02208 13 37035988 37036942 GST