Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00616 ATGGTTTACCGAATCAGCATTCCACATAGTTCTACCAAACAAAAACACTTCCCAGGATTATGGATTTCACAAGTCAATTATCTCTTTGAGTCCAATGTCATATGGGTAGCTAACAGAAACCAGCCACTAAAGAAGAGCTCTTCTGGAATTATTCAAATTTATGAGAATGACAATCTTGTGGTTTTAGATAGCAACAAAAGGGTTGTTTGGTCATCAAATGTGGCACATATTGCAACAAATTCAACTGCAAAACTTTTAGAAACTGGAAATCTAGTCCTGCTAGATGATGCCACGGGAGAAAGTATATGGGAGAGTTTCCAACATCCTTGTGATGCTCTTGTGCCAAAGTTGAAACTTAGTATTAAAAAAAAACATGTGAGAAATGGGTGTGTGAGGAGTGAGCCACTACAATGTGGTGAACACATAAATGGAAGTGAAGTCTGCAAAGATGGGTTTTTGAGGCTTGAGAATATGAAAGTGCCAGACTTTGTACAAAGGTTAGATTGTTTGGAAGATGAATGCAGAGCACAGTATTTGGAGAATTGCTCTTGCGTGGTCTACGCGTATGACAGTGGCATTGGATGCATGGTTTGGAATGGAAACTTGATTGACATACAGAAATTTTCTAGTGGAGGGGTTGATCTTTACATTCGTGTGCCACCTTCAGAATCAGAACTTGGTATGTTCTTTTTTGGACAATTGAAagatggacacgaaatagcattgaaaagactttcaaaaacctcaggacaaggtttagaagaatgtatgaatgaggtattagtgatttcaaagcttcaacatcgcaatcttgtcagacttcttggttgctgtattgaacaggaggaaaatatgttggtatacgagtttatgaatgaagtggtggtcatttctaagcttcaacattgcaatcttgtcaaacttctcggctgctgtgttgaaggagatgaaaagatgctcatctatgagttcatgccaaataaaagtttagacgcattcatctttgatccactccggcataaactgctagactggacaaaacgttttaatatgattgaaggagttgctcgtggcttactctatcttcatagagattctagattaaaaattatacgtagagatttgaaggcaagcaatgtcttgctagatgcagagatgaatccaaaaatatcggattttggtttggctagaatatataaaggcgaggaagaagttaataccaaaagagttgttggcacatatggctacatgcccccggaacatgcaatggaaggactgttttctgagaaatcagatgtctatagcttgggtgttttgttattggagattattagtggaaaaagaaacactagttttcgtaatgatgaccagtctctcagccttataggatatGCATGGCAACTATGGAATGAAGAGGAGATTGTATCTCTGATTGATCCAGAAATATTCAATCCAGATAATGTCaatcacatattgagatgcatacacatcggacttctatCTCACACTAATACCATGGCAGCGGCGACGATAATCTACTTTTATTTTTTTCTCTTCTCCTTCGTCTCTTTCCACCATTTATTGTTTTCTTTCGCAGCTAGTTCTAAGACCAGGATCACGCAGGGCGTCACGATCAGGGACAAAGAGCATGAAacattggtgtcagaagagctcaacttttcgatgggtttcttcagttccgacaactcctcttcccgctacgttggaatttggtacgacaacattcccggaccagaagttatatgggtcgcaaaccgcgacaaaccgatcaacggcaCCGGAGGAGCCATCACTATTTCCAATGACGGCAACCTCGTAGTCCTCGACGGAGCCATGAACCATGTTTGGTCCTCAAACGTTTCCAATATTAACAGCAACAACAAAAACTCCTCAGCATCGCTTCATGACGATGGCAACCTCGTTCTCACATGCGAAAAGAAAGTGGTTTGGCAAAGCTTCGAGAATCCAACGGATACATACATGCCCGGTATGAAGGTGCCAGTGGGTGGATTGAGCACTAGCCATGTCTTCACTTCATGGAAATCAGCCACGGATCCTTCAAAGGGAAACTACACTATGGGGGTGGATCCTGAAGGGTTACCTCAGATAGTGGTTTGGGAAGGGGAAAAAAGAAGGTGGAGAAGTGGGTATTGGGATGGTAGAATGTTTCAAGGGTTGTCCATCGCAGCAAGTTATCTTTACGGTTTCACGCTTAATGGGGACGGTAAAGGTGGTAGGTATTTCATATATAACCCGTTAAACGGCACGGATAAGGTGAGGTTTCAAATAGGGTGGGATGGATACGAGAGAGAGTTCAGGTGGAATGAGGATGAGAAGAGTTGGAGTGAGATTCAAAAAGGGCCTTTTCACGAGTGTGATGTTTATAACAAGTGTGGGAGTTTCGCGGCGTGTGATTTGTTAACGTTGTTCCCTTCTTCGGATTTAGTACCTGTTTGTACTTGCATACGAGGTTTTGAACCGAAGCATAGGGATCAGTGGGAAAAGGGGAACTGGTCGGGTGGGTGTACGAGGATGACTCCGCTCAAGGCTCAGAGGATTAATGTTACTTCTTCTGGGACTCAGGTTAGTGTTGGAGAGGATGGGTTCTTGGATCGTAGGTCTATGAAGTTGCCCGATTTCGCACGTGTGGTTGGCACGAATGATTGTGAGAGAGAGTGTTTGAGCAATGGTTCTTGTACGGCGTATGCCAATGTTGGATTAGGGTGCATGGTGTGGCATGGGGACTTGGTTGATATTCAACATTTGGAAAGTGGAGGGAACACATTGCACATACGCCTCGCTCATTCTGATTTAGGTAAGGTAAAGAATGATGTTAAAAAGAACAGGATTGTGATAATATCAACGACTGGGGCGGGGTTAATCTGTCTAGGAATCTTTGTATGGCTGGTCTGGAGATTCAAGGGAAAACTTAAAGTTCTGCCTACAGTTTCCTCAGTTTCTTGTTGCAAGAGTAGTGATGCACTACCAGTTTTTGATGCAAACAAGAGCAGAGAAATGTCAGCAGAATTTTCAGGATCAGCTGACCTTAGTTTGGAGGGGAACCAATTAAGTGGACCAGAATTTCCAGTTTTCAATtttagctgcatttcaatagccacaaacaatttctctgaagaaaataagcttgggcaagggggctttggccctgtctacaagggaaagcttccaggcggagaacaaatagctgttaagaggctctcaagacggtctggccaaggtttagaggagttcaagaatgaaatgatgctgatagccaaattacaacacagaaatttagttagattaatgggttgctctattcaaggggaggagaagttgctggcatatgaatacatgccaaacaaaagcttggattgctttttatttgatcctgtcaaacaaaaacaactagcttggagaagacgtgttgaaatcattgaaggcattgcaagaggattactttatttgcaccgggattcaagacttagaataatacatcgagatttaaaagcgagtaacattttgttggatgaaaacatgaacccaaaaatatcagactttggcttggccaggatatttggtgggaaccagaatgaagccaatacaaacagagtagttggtacatatggttatatggcccctgaatatgcaatggaaggtctgttttcagtaaaatctgatgtatatagttttggtgtattactactagagattttgagtggccgcagaaacactagctttcgtcactcagatgactcaagcctcataggatatGCATGGCATCTTTGGAATGAACACAAAGCAATGGAGCTTCTTGATCCTTGCATTCGTGATTCTAGTCCTAGAAACAAGGCTTTGAGATGCATACACATAGGGATGCTATGTGTGCAAGATTCAGCAGCTCATAGGCCAAACATGTCTGCTGTGGTGTTGTGGCTGGAAAGTGAAGCAACAACTCTTCCCATACCTACGCAACCTTTGATTACTTCAATGAGGAGAACTGAGGACAGAGAATTTTACATGGATGGCCTTGATGTTTCAAATGATTTGACAGTCACAATGGTGGTAGGGAGATAG 4098 0.2689 MVYRISIPHSSTKQKHFPGLWISQVNYLFESNVIWVANRNQPLKKSSSGIIQIYENDNLVVLDSNKRVVWSSNVAHIATNSTAKLLETGNLVLLDDATGESIWESFQHPCDALVPKLKLSIKKKHVRNGCVRSEPLQCGEHINGSEVCKDGFLRLENMKVPDFVQRLDCLEDECRAQYLENCSCVVYAYDSGIGCMVWNGNLIDIQKFSSGGVDLYIRVPPSESELGMFFFGQLKDGHEIALKRLSKTSGQGLEECMNEVLVISKLQHRNLVRLLGCCIEQEENMLVYEFMNEVVVISKLQHCNLVKLLGCCVEGDEKMLIYEFMPNKSLDAFIFDPLRHKLLDWTKRFNMIEGVARGLLYLHRDSRLKIIRRDLKASNVLLDAEMNPKISDFGLARIYKGEEEVNTKRVVGTYGYMPPEHAMEGLFSEKSDVYSLGVLLLEIISGKRNTSFRNDDQSLSLIGYAWQLWNEEEIVSLIDPEIFNPDNVNHILRCIHIGLLSHTNTMAAATIIYFYFFLFSFVSFHHLLFSFAASSKTRITQGVTIRDKEHETLVSEELNFSMGFFSSDNSSSRYVGIWYDNIPGPEVIWVANRDKPINGTGGAITISNDGNLVVLDGAMNHVWSSNVSNINSNNKNSSASLHDDGNLVLTCEKKVVWQSFENPTDTYMPGMKVPVGGLSTSHVFTSWKSATDPSKGNYTMGVDPEGLPQIVVWEGEKRRWRSGYWDGRMFQGLSIAASYLYGFTLNGDGKGGRYFIYNPLNGTDKVRFQIGWDGYEREFRWNEDEKSWSEIQKGPFHECDVYNKCGSFAACDLLTLFPSSDLVPVCTCIRGFEPKHRDQWEKGNWSGGCTRMTPLKAQRINVTSSGTQVSVGEDGFLDRRSMKLPDFARVVGTNDCERECLSNGSCTAYANVGLGCMVWHGDLVDIQHLESGGNTLHIRLAHSDLGKVKNDVKKNRIVIISTTGAGLICLGIFVWLVWRFKGKLKVLPTVSSVSCCKSSDALPVFDANKSREMSAEFSGSADLSLEGNQLSGPEFPVFNFSCISIATNNFSEENKLGQGGFGPVYKGKLPGGEQIAVKRLSRRSGQGLEEFKNEMMLIAKLQHRNLVRLMGCSIQGEEKLLAYEYMPNKSLDCFLFDPVKQKQLAWRRRVEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFGGNQNEANTNRVVGTYGYMAPEYAMEGLFSVKSDVYSFGVLLLEILSGRRNTSFRHSDDSSLIGYAWHLWNEHKAMELLDPCIRDSSPRNKALRCIHIGMLCVQDSAAHRPNMSAVVLWLESEATTLPIPTQPLITSMRRTEDREFYMDGLDVSNDLTVTMVVGR 1365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00616 1365 SUPERFAMILY Protein kinase-like (PK-like) 1035 1348 IPR011009 -
Gma15g00616 1365 SUPERFAMILY alpha-D-mannose-specific plant lectins 26 111 IPR036426 -
Gma15g00616 1365 CDD STKc_IRAK 1056 1317 - -
Gma15g00616 1365 ProSiteProfiles Protein kinase domain profile. 202 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00616 1365 Pfam Protein tyrosine and serine/threonine kinase 289 449 IPR001245 GO:0004672|GO:0006468
Gma15g00616 1365 Pfam Protein tyrosine and serine/threonine kinase 1053 1317 IPR001245 GO:0004672|GO:0006468
Gma15g00616 1365 SMART serkin_6 1050 1301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00616 1365 SMART serkin_6 224 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00616 1365 CDD PAN_AP_plant 135 220 - -
Gma15g00616 1365 Gene3D - 24 143 - -
Gma15g00616 1365 Pfam PAN-like domain 872 926 IPR003609 -
Gma15g00616 1365 Pfam PAN-like domain 149 205 IPR003609 -
Gma15g00616 1365 CDD B_lectin 551 663 IPR001480 -
Gma15g00616 1365 Gene3D Phosphorylase Kinase; domain 1 1026 1125 - -
Gma15g00616 1365 Gene3D Phosphorylase Kinase; domain 1 290 324 - -
Gma15g00616 1365 Gene3D Phosphorylase Kinase; domain 1 219 289 - -
Gma15g00616 1365 ProSiteProfiles PAN/Apple domain profile. 871 941 IPR003609 -
Gma15g00616 1365 ProSiteProfiles Protein kinase domain profile. 1050 1300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00616 1365 Pfam D-mannose binding lectin 33 129 IPR001480 -
Gma15g00616 1365 Pfam D-mannose binding lectin 587 688 IPR001480 -
Gma15g00616 1365 CDD B_lectin 28 109 IPR001480 -
Gma15g00616 1365 CDD PAN_AP_plant 873 941 - -
Gma15g00616 1365 SMART blect_4 544 663 IPR001480 -
Gma15g00616 1365 SMART blect_4 4 109 IPR001480 -
Gma15g00616 1365 Pfam S-locus glycoprotein domain 720 835 IPR000858 GO:0048544
Gma15g00616 1365 Gene3D - 530 660 IPR036426 -
Gma15g00616 1365 SUPERFAMILY Protein kinase-like (PK-like) 289 494 IPR011009 -
Gma15g00616 1365 ProSiteProfiles Bulb-type lectin domain profile. 536 662 IPR001480 -
Gma15g00616 1365 ProSiteProfiles Bulb-type lectin domain profile. 1 106 IPR001480 -
Gma15g00616 1365 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 516 1365 - -
Gma15g00616 1365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1171 1183 IPR008271 GO:0004672|GO:0006468
Gma15g00616 1365 SMART ntp_6 147 219 IPR003609 -
Gma15g00616 1365 SMART ntp_6 871 940 IPR003609 -
Gma15g00616 1365 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 516 1365 - -
Gma15g00616 1365 SUPERFAMILY Protein kinase-like (PK-like) 227 292 IPR011009 -
Gma15g00616 1365 SUPERFAMILY alpha-D-mannose-specific plant lectins 586 727 IPR036426 -
Gma15g00616 1365 ProSiteProfiles PAN/Apple domain profile. 148 220 IPR003609 -
Gma15g00616 1365 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 289 501 - -
Gma15g00616 1365 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 163 227 - -
Gma15g00616 1365 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 31 124 - -
Gma15g00616 1365 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 226 292 - -
Gma15g00616 1365 Gene3D Transferase(Phosphotransferase) domain 1 1126 1328 - -
Gma15g00616 1365 Gene3D Transferase(Phosphotransferase) domain 1 325 505 - -
Gma15g00616 1365 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 289 501 - -
Gma15g00616 1365 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 163 227 - -
Gma15g00616 1365 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 31 124 - -
Gma15g00616 1365 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 226 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00616 Gma-Chr15 5045288 5064638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00616 226 520 Receptor kinase-like Gene Family AT4G23230 48.311 1.44e-82 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma15g00616 PK_Tyr_Ser-Thr 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00616 - - gmx:106794169 1695.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00616 15 5045288 5064638 Gma13g02213 13 37075272 37079151 GST
Gma15g00616 15 5045288 5064638 Gma07g01830 07 39494503 39498948 PCT
Gma15g00616 15 5045288 5064638 Gma08g00576 08 4756015 4761037 PCT