Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00615 ATGCCAGGTTTCTTATTCTTCCTCTTTTGCTTCTTCTTGGCATCATCACAACACATCGCAATTTCATTCTCCACAGACACCTTAAGCTCAACACAAATTCTTCTAACCAACCAAACCCTCGTATCACCAAGCCACATCTTCGCTCTGGGCTTCTTTCCGGGGACCAATTCCACATGGTACTtaggcacatggtacaacaacatcaccgacgacaaaaccgtagtatgggtggccaatagagacaaccctctcgagaattccagtggttttctaaccatcggagaaaaccgaaacatcgtcctcagaaatccatcaaagaagaaccccgtttggtcctccaacgcaactaaagccaacaaccccgtgcttcagcttttggacacaggaaacctaattctcagagaagcaaacataaccgacccgacaaagtatctctggcaaagcttcgattacccaacagacacactcttacccggcatgaaaatggggtggaacctagacactggcgcggagaaacacttaacatcgtggaaaaacacagggagcgacccttcaagcggagattattctttcaagatagacacacgtggaataccagaaattttcttaagggatgatcaaaacattgcatacagaagtggcccttggaatggTGAGAGATTCAGTGGGGTGCCAGAGATGCAACCCGACACAGATTCTATAACGTTTGATTTTTCTTATGATAAACATGGTGTGTACTATTCGTTCTCCATTGGGAACCGTTCGATTTTGTCGAGGCTGGTTGTGACTTCGGGTGGTGAACTTAAGCGTCTTACTTGGGTGCCAAGTAGCAAAACTTGGACCACGTTTTGGTACGCGCCTAAGGATCAGTGTGACGGCTACAGAGCGTGTGGTCCATATGGGTTGTGTGACTCCAACGCTTCGCCGGTTTGCACGTGCGTGGGAGGGTTCAGGCCGAGGAACCAGCAGGCGTGGAATTTGAGAGATGGGTCTGATGGGTGTGAGAGGAACACGGATTTGGATTGTGGGAATGACAAGTTTTTGCATGTCAAGAACGTGAAGCTGCCGGAGACAACCTATGTGTTTGCGAACGGGAGCATGAACCTAAGGGAGTGTCAGGATTTGTGCCTCAGGGATTGTTCTTGCACTGCTTATGCCAACATTCAGATCACAAACGGAGGAAGCGGATGCGTGACGTGGAGTGGTGAACTCGAAGATATGAGGCTGTATCCTGCGGGTGGACAACATCTCTATGTTAGATTAGCAGCTTCTGACGTAGATGACATAGTAGGTGGCTCTCACAAGAAAAACCATACAGGTGAGGTTGTAGGAATTACAATTTCTGCAGCTGTAATAATTTTGGGATTGGTTGTCATTTTCTGGAAGAAGAGGAAACTGTTCAGTATATCAAATGTTAAGACAGCCCCTAGAGGTTCTTTCCGAAGAAGTCGGGATTTGCTAACGAGTGAGAGGATGTTTTCAACTAATAGAGAAAACTCAGGAGAAAGGAACATGGATGACATAGAGTTGCCAATGTTTGATTTTAATACCATAACAATGGCCACAGACAACTTCTCTGAAGCAAATAAACTTGGACAAGGAGGCTTTGGTATTGTTTACAGGGGCAGGTTGATGgaaggccaagatattgctgtcaagaggttatcaaaaaactccgtgcaaggagttgaagaatttaagaatgaggtcaagttaattgtcaggcttcaacatcgaaatcttgttcggctctttggttgctgcattgagatggatgagaagttgctagtgtatgagtacatggaaaatagaagccttgattctattttgtttgacaaagccaaaaaacccatattggattggaaaagacgcttcaacattatatgtggcatagctagagggctactttatctgcaccatgattccagatttaggattatccatagggatctcaaggcaagcaacattctacttgatagtgaaatgaacccaaagatatcagactttgggatggctagactttttggcacgaatcagacagaagcaaacacattgagagttgttggaacatatggctatatgtcccctgaatatgctatggatgggaacttctcagtgaaatctgatgtttttagctttggagttctagtgctggaaattataactgggaaaaaaaatagaggattctattactcaaatgaagatatgaatcttctagggaatgcatggaggcagtggagagatggcagtacattggaactcattgattcatccattggcgattcatgttcacaatctgaagttcttagatgcatacacgttggactcttgtgtgtccaagaacgtgcagaagataggccaacaatgtcttcagtgttattgatgctgagtagtgaatccgcaataatgccacaacccagaaaccctggGTTTTCCATAGGGAAGAATCCTGTGGAGACCGATTCTTCTTCAAGCAAGAAAGATCAATCATGGAGTGTGAACCAAGTCACAGTCACATTACTAGATGCTAGGTAG 2535 0.2284 MPGFLFFLFCFFLASSQHIAISFSTDTLSSTQILLTNQTLVSPSHIFALGFFPGTNSTWYLGTWYNNITDDKTVVWVANRDNPLENSSGFLTIGENRNIVLRNPSKKNPVWSSNATKANNPVLQLLDTGNLILREANITDPTKYLWQSFDYPTDTLLPGMKMGWNLDTGAEKHLTSWKNTGSDPSSGDYSFKIDTRGIPEIFLRDDQNIAYRSGPWNGERFSGVPEMQPDTDSITFDFSYDKHGVYYSFSIGNRSILSRLVVTSGGELKRLTWVPSSKTWTTFWYAPKDQCDGYRACGPYGLCDSNASPVCTCVGGFRPRNQQAWNLRDGSDGCERNTDLDCGNDKFLHVKNVKLPETTYVFANGSMNLRECQDLCLRDCSCTAYANIQITNGGSGCVTWSGELEDMRLYPAGGQHLYVRLAASDVDDIVGGSHKKNHTGEVVGITISAAVIILGLVVIFWKKRKLFSISNVKTAPRGSFRRSRDLLTSERMFSTNRENSGERNMDDIELPMFDFNTITMATDNFSEANKLGQGGFGIVYRGRLMEGQDIAVKRLSKNSVQGVEEFKNEVKLIVRLQHRNLVRLFGCCIEMDEKLLVYEYMENRSLDSILFDKAKKPILDWKRRFNIICGIARGLLYLHHDSRFRIIHRDLKASNILLDSEMNPKISDFGMARLFGTNQTEANTLRVVGTYGYMSPEYAMDGNFSVKSDVFSFGVLVLEIITGKKNRGFYYSNEDMNLLGNAWRQWRDGSTLELIDSSIGDSCSQSEVLRCIHVGLLCVQERAEDRPTMSSVLLMLSSESAIMPQPRNPGFSIGKNPVETDSSSSKKDQSWSVNQVTVTLLDAR 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00615 844 CDD B_lectin 31 152 IPR001480 -
Gma15g00615 844 PANTHER - 16 843 - -
Gma15g00615 844 Pfam PAN-like domain 342 407 IPR003609 -
Gma15g00615 844 Gene3D Transferase(Phosphotransferase) domain 1 601 805 - -
Gma15g00615 844 ProSitePatterns Protein kinases ATP-binding region signature. 531 553 IPR017441 GO:0005524
Gma15g00615 844 ProSiteProfiles PAN/Apple domain profile. 342 422 IPR003609 -
Gma15g00615 844 Pfam Domain of unknown function (DUF3403) 798 844 IPR021820 GO:0004674
Gma15g00615 844 SMART serkin_6 525 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00615 844 PIRSF SRK 1 844 IPR024171 GO:0004674
Gma15g00615 844 ProSiteProfiles Bulb-type lectin domain profile. 25 146 IPR001480 -
Gma15g00615 844 MobiDBLite consensus disorder prediction 815 832 - -
Gma15g00615 844 CDD STKc_IRAK 531 796 - -
Gma15g00615 844 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 843 - -
Gma15g00615 844 Pfam S-locus glycoprotein domain 211 320 IPR000858 GO:0048544
Gma15g00615 844 SMART ntp_6 342 421 IPR003609 -
Gma15g00615 844 Pfam D-mannose binding lectin 73 178 IPR001480 -
Gma15g00615 844 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 218 IPR036426 -
Gma15g00615 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Gma15g00615 844 Pfam Protein tyrosine and serine/threonine kinase 528 793 IPR001245 GO:0004672|GO:0006468
Gma15g00615 844 Gene3D Phosphorylase Kinase; domain 1 499 600 - -
Gma15g00615 844 ProSiteProfiles Protein kinase domain profile. 525 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma15g00615 844 CDD PAN_AP_plant 338 422 - -
Gma15g00615 844 SMART blect_4 31 152 IPR001480 -
Gma15g00615 844 SUPERFAMILY Protein kinase-like (PK-like) 503 796 IPR011009 -
Gma15g00615 844 MobiDBLite consensus disorder prediction 806 832 - -
Gma15g00615 844 Gene3D - 20 149 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00615 Gma-Chr15 5034607 5041025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00615 513 844 Receptor kinase-like Gene Family AT4G11530 58.160 2.22e-133 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma15g00615 PK_Tyr_Ser-Thr 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00615 - - gmx:100797331 1701.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00615 15 5034607 5041025 Gma13g02217 13 37102505 37107552 GST
Gma08g00579 08 4773099 4782379 Gma15g00615 15 5034607 5041025 PCT