Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00613 ATGGCGGCTGAGGCTCAGCTTCCTGACCACTTCAAGTGTCCGATTTCCCTGCAAATCATGTCCGACCCCGTCATCCTCTCTTCCGGCCACACCTTCGACCGCTCCTCCATCCAGCGCTGGCTGGACGCCGGCCACCGCACTTGCCCAATTACCAAACTGCCCCTCCCTGCACACTCCTCCCTCATCCCCAACCACGCCCTCCGAAGCCTAATCTCCAACTACGCCCCCATCAACCCTCAACAACACCACCACCCCCAAACCCTAATCTCTTCCCTCACCTCTCTCTCCTCCCCTCTCCCCTCCAAACTCGACGCGCTCCACCACCTCACGCGCCTCTCTCACTCCGACTCCCTCTTCCGCCGCCGCCTCTTCAATTCcCCCGCCCTCGTCCCCGCCCTCTTAACCTGCCTCCAACACATCTCCGCCGACCTCCGCCATCGCGCCCTCTCCCTCCTCCTCCACCTCTCCCTCGACGACGACGCCAAGGTCGGCCTCGTCGCCGAGGGCCTCCTCTCCCCTCTCATCACTCTACTCCTCTCCGCCGCCCCCTCCGACTGCCGCGCCCTCTCCGCCACCCTTCTCACCAGCCTCGCCGTCCTCCACGTCAACAAGGCCACCATCGGAGCCTTCCCCGGCTCCATCCACGCCCTCGTCACACTCCTCCGGGACGGTAAAGGCAGAGAAAGAAAAGAAGCCGCCACCGCGCTCTACGCCCTCTGCTCCTTCCCCGACAACCGCCGTAGAGCGGTAGAGTGCAGCGCCGTTCCTGTTCTGCTTCGAAGCGCCGATTCCGGGCTTGAGAGGAGCGTTGAGGTTATTGGGGTTTTGGCGAAGTGTAAAGAGGGGAGGGAACACATGGAACGGTTTCGCGGGTGTGTGCAGATTCTTACTCGCGTGTTGAGGAATGGAAGCTCCAGAGGAGTTCAGTATGCTCTTATGGCTCTCTATTCTCTCTGTTGTCACAGTGAAGAAACTGTTGTCGAGGCTTTACGAAATGGGGTTTTGGATATTTGTCAAGGCTTGGTCGAGGATGATAATGCCAAGGTCAAGAGGAATTCGTCCTGTTTGGTTCAGCTTCTCCGTGGGAACACCCATCGCTTGAGTTAG 1107 0.5989 MAAEAQLPDHFKCPISLQIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITKLPLPAHSSLIPNHALRSLISNYAPINPQQHHHPQTLISSLTSLSSPLPSKLDALHHLTRLSHSDSLFRRRLFNSPALVPALLTCLQHISADLRHRALSLLLHLSLDDDAKVGLVAEGLLSPLITLLLSAAPSDCRALSATLLTSLAVLHVNKATIGAFPGSIHALVTLLRDGKGRERKEAATALYALCSFPDNRRRAVECSAVPVLLRSADSGLERSVEVIGVLAKCKEGREHMERFRGCVQILTRVLRNGSSRGVQYALMALYSLCCHSEETVVEALRNGVLDICQGLVEDDNAKVKRNSSCLVQLLRGNTHRLS 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00613 368 PANTHER U BOX DOMAIN-CONTAINING 1 367 - -
Gma15g00613 368 Pfam U-box domain 8 74 IPR003613 GO:0004842|GO:0016567
Gma15g00613 368 SMART Ubox_2 10 74 IPR003613 GO:0004842|GO:0016567
Gma15g00613 368 Gene3D - 91 368 IPR011989 -
Gma15g00613 368 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 1 367 - -
Gma15g00613 368 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 76 IPR013083 -
Gma15g00613 368 SUPERFAMILY RING/U-box 5 80 - -
Gma15g00613 368 CDD RING-Ubox_PUB 11 52 IPR045210 -
Gma15g00613 368 ProSiteProfiles U-box domain profile. 6 81 IPR003613 GO:0004842|GO:0016567
Gma15g00613 368 SUPERFAMILY ARM repeat 86 359 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00613 Gma-Chr15 5015708 5016814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00613 7 362 U-box Gene Family AT4G21350 56.131 1.95e-134 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00613 - - gmx:100796272 676.781