Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00609 ATGGCTGAGGAGTTTCAAGCTGCTATTTGTGGTGAAAGTTGGTGGAATATTATTAATCCAACAAGAAGTGTGTTTCCTCTTATGCCATCAACTTGTTCTGTGGCAGCAGCTGATGCAGGAAACTACAGCACTTGGCAAAGTACTACTGATTTCGTGGATTTGAAGGGAACAAGGTCTTGTGCTGAGGAGACTGATATTAACTTGGTTTCTTCTGATACTTCTCTGAGTTTTCTTGATGCCGAGAAGCCACACCAGAGCGGAACTGGTAGCATCTTGATCGATTCCACCTTACAAATGATGGGTTTTGGCATGTCATCTTCAACTTCACCGAATTGGAGTCAATCTTTATTAGGGAGCAGTTTTGATTCTGTGCTTCAAGAAGAAACAGGCATAGGTGGTGGTGGTTCTTCCAATGATTCACAAATCCAAAAGGATTGGAGTCCAAAGAATTTCTCATCTGATGGTGGCAGCGAGCAAGTTTCCACCGTTGATGCTTTCAAGCCAATGAACCAAGAATTTTCCTTGAATCAGCAGAGTCTGAATTCTGTTGTTACAAGCACTGATGGATCATTATCTGGTGGTAATTTCCCAGTTGTTTCAGCCTCCTACGGTTACCCTTCAACATTGATACAAAGCTTATATGAGCATCAACCACAACCACAGAATTCACTTTTCACCAACCCCTCCATGTCCTATGGGACATGTTCCAATGAACTGTCACCAACTTGGTCCAAAGTCTCTTCCTTTCTCAAACCCTCAATGCCAAAGCAACAGCTCCGTGGATTGCACTTTTCCAACAACACTACTCCTTTCTGGAATTCTTCAGCCGAAGCGCTTAATGACATAAGAGCAGGTGTTTTTGCTTCATCACAGGCCCAATATCAAACTCCAAAATTTGAAGAGAAACCCAACTGCCCCCATACTCTATTAAAGAAGCTCAAGAGAGAAGAATCACCAGACGCAGCGAAGAAAAATTCTCCTGAGCCTGCCGCATTCAAGAGGCAAAGAATTGAGACTCCATCTCCATTACCAACTTTTAAGGTTAGGAAAGAAAAGCTGGGGGACCGCATCACTGCTCTTCAGCAATTGGTTTCACCTTTCGGAAAGACGGACACGGCATCCGTTCTTCACGAAGCCATCGAGtacatcaagttccttcatgaccaagtcagtGTATTGAGGACTCCATATATGAAAAACAATGGAGCTCCCATTCAACACCAGCAGGATTGTGATAATCTGAAGGACTCAGAAGGGCCAAAGCAAGATTTGAGAAGCCGAGGGCTGTGTTTGGTGCCGGTTTCAAGCACATTCCCGGTCGCTAATGAGACCATTGTTGACTTCTGGACGCCTACATTTGGAGGCGCACTCATTGGCAAGTAG 1383 0.4346 MAEEFQAAICGESWWNIINPTRSVFPLMPSTCSVAAADAGNYSTWQSTTDFVDLKGTRSCAEETDINLVSSDTSLSFLDAEKPHQSGTGSILIDSTLQMMGFGMSSSTSPNWSQSLLGSSFDSVLQEETGIGGGGSSNDSQIQKDWSPKNFSSDGGSEQVSTVDAFKPMNQEFSLNQQSLNSVVTSTDGSLSGGNFPVVSASYGYPSTLIQSLYEHQPQPQNSLFTNPSMSYGTCSNELSPTWSKVSSFLKPSMPKQQLRGLHFSNNTTPFWNSSAEALNDIRAGVFASSQAQYQTPKFEEKPNCPHTLLKKLKREESPDAAKKNSPEPAAFKRQRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSVLRTPYMKNNGAPIQHQQDCDNLKDSEGPKQDLRSRGLCLVPVSSTFPVANETIVDFWTPTFGGALIGK 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00609 460 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 337 386 IPR011598 GO:0046983
Gma15g00609 460 Gene3D - 347 404 IPR036638 GO:0046983
Gma15g00609 460 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 347 401 IPR036638 GO:0046983
Gma15g00609 460 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 48 448 - -
Gma15g00609 460 MobiDBLite consensus disorder prediction 314 341 - -
Gma15g00609 460 CDD bHLH_AtbHLH_like 343 394 IPR045239 -
Gma15g00609 460 MobiDBLite consensus disorder prediction 314 331 - -
Gma15g00609 460 PANTHER TRANSCRIPTION FACTOR BHLH123 48 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00609 Gma-Chr15 4984799 4988153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00609 223 457 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 50.407 1.33e-54 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00609 - - gmx:100794682 931.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00609 15 4984799 4988153 Gma15g00609 15 4984799 4988153 ECH
Gma15g00609 15 4984799 4988153 Gma13g02224 13 37158649 37161732 GST
Gma07g01827 07 39436647 39439924 Gma15g00609 15 4984799 4988153 PCT
Gma08g00583 08 4823513 4827259 Gma15g00609 15 4984799 4988153 PCT
Gma15g00609 15 4984799 4988153 Gma07g01827 07 39436647 39439924 PCT
Gma15g00609 15 4984799 4988153 Gma08g00583 08 4823513 4827259 PCT