Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00603 ATGCTTGAGGCTTGGGTTTCTCTCAAGAAGACACTTCAATGCAAACCACAGCCAAATCAAGTTCATGATCCAAAGATTACTAGGCAGCAAAAAGGTAATCAGAGAACAAAGTCAAGTAATCTAGAGAGTTCAAATACCAAAGATTTCATCCAAGGAAGCAAGAAGCACTTAAAAAAATCACTAAGTTATAGAGGGGACATTGACATCACTAGTCCCATAACCCATGAAATTGTTCTCGACAGCTCAAACAATGGAACTTGTCGATGTTGTCCTTGTCCTCAAAGCAATAACGGCAATAAAGGTTCGGAAGGTTCTCATAGAACACGAAGGTCAGCTACATCTTCAAAAATAACAATGACATATCCTGTTGATTACAATGAAGCAAATGTTTCCTCCAACACAAGGGCGTTGGTTCAGATGGATTCTGATGGTTGTTCCACATTGACATGTCATAAATGTCGCAAGAAAATGAAAAATCTTGATGCTGTAGAAGCACACCATATCTCCCAGCATTCAGTCACTGAACTTGAAGAAGATTCATCTAGACAGATAATAGAAACAATATGTGGAAGTGGAACAAGCTCTATTATTAATTCGGAAAACATGTTGGGGCAGATTGATTGCATTTTAAAGGTTCTGAATGTACCAAAAACCTTTGCTTGCTTTGAGGAATATAGAGAAAAGGTGAAGGATAACGCTGACAAACTACAGAAGAAGCATCCACGTTGTGTGGCTGATGGAAATGAGCTTTTAAGGTTCCATGGCACAACTATTGCATGCTCTCTTGGCACAAACAGTTCTAGCCTGTGCACTTTAGACTATTGTGGCATATGTCAAATCCTGCGAAATGGCTTCTCCACCAACAAGGAATTCCATGGTGCATTGGGGGTTTACACCACTTCCACAAGTGGGAAAGCCTTTGAATCCATTTCCATCATGACATCCCATGAGAGGCCATTTCCTAGAAAGTCTGTCATAGTGTGCAGAGTAATAGCTGGGAAAATTCATAGTCCTCTTGAAGAAGAAAGGGTTGATTCAGAGTTTGATTCATTGGCAGAAAAAATAAATGGTCATTCTTCAGATGCTGAGGAACTCTACGTGTTAAATCCCAAAGCCCTTCTCCCATGCTTTGTGGTGATCTACAAACATCAAACAGACAAGTGTCTCATCACGTCTCGCGATCTCTTCAAAGGCGAAGGGGAAGGCTTCAGGGGTTTGAAAAAGGTTGATATTGAAGCCATGGTTCTTGACTCCATTCTGACTTCTCCTCGTCTCAAGTCTCCATCTTTCAGGAGGCAGTTTACAAAGGATGAACTGGGGGCCAGTGGCACCTGTTCCGGGTTGACTGGAGCCCAGAAAGCTTCATGCCATATGGAGCTTGTTAAGGATTCTGTGGCCAAGGGTAAACTGAAGATTCTTTGA 1422 0.4163 MLEAWVSLKKTLQCKPQPNQVHDPKITRQQKGNQRTKSSNLESSNTKDFIQGSKKHLKKSLSYRGDIDITSPITHEIVLDSSNNGTCRCCPCPQSNNGNKGSEGSHRTRRSATSSKITMTYPVDYNEANVSSNTRALVQMDSDGCSTLTCHKCRKKMKNLDAVEAHHISQHSVTELEEDSSRQIIETICGSGTSSIINSENMLGQIDCILKVLNVPKTFACFEEYREKVKDNADKLQKKHPRCVADGNELLRFHGTTIACSLGTNSSSLCTLDYCGICQILRNGFSTNKEFHGALGVYTTSTSGKAFESISIMTSHERPFPRKSVIVCRVIAGKIHSPLEEERVDSEFDSLAEKINGHSSDAEELYVLNPKALLPCFVVIYKHQTDKCLITSRDLFKGEGEGFRGLKKVDIEAMVLDSILTSPRLKSPSFRRQFTKDELGASGTCSGLTGAQKASCHMELVKDSVAKGKLKIL 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00603 473 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 383 - -
Gma15g00603 473 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 383 - -
Gma15g00603 473 MobiDBLite consensus disorder prediction 15 53 - -
Gma15g00603 473 SUPERFAMILY ADP-ribosylation 177 391 - -
Gma15g00603 473 MobiDBLite consensus disorder prediction 15 48 - -
Gma15g00603 473 Gene3D - 164 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00603 Gma-Chr15 4939981 4945109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00603 4 382 C2H2 Transcription Factor Family AT5G54630 42.105 1.18e-94 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00603 - - gmx:100792577 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g01817 07 39324291 39326993 Gma15g00603 15 4939981 4945109 PCT
Gma15g00603 15 4939981 4945109 Gma07g01817 07 39324291 39326993 PCT