Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00597 ATGAGTAATAGTAATTGGGTGTTGGATTATGATTATCTAGACAACATTCCTCTCACCACCCTTGAACCACCCAATTTCTCTTGGTCTTCCTCCTCTCCTCCTCCTACACTCAGTGTGGAGCTAGATGACTCATTTGGAATTTTGGATGGTCTCAAGGAAAACAGGTCAAGAAAACGTTTGAGGCCATCTGATTCTAAAGCATGTAGAGAGAAAATGCGAAGGGATCGACTTAATGACAGGTTTATGGAACTGGGGTCTATCTTGGACCCTAGAAAGCCTCTCAAAATGGACAAGGCTGTTATATTAAGTGATGCAGTTCGAGTTGTTTCTCAGTTACGAGAGGAAGCTCAAAAGCTGAGGGAGTCCACTGAGAATCTACAAGAGAAAATCAATGCATTGAAGGATGAGAAAAATGAGCTTCGCGATGAGAAGCAGCGACTAAAAGTAGAGAAAGAAAACCTTGAGCAGAAGGTTAAAGCTTTGAGTTCACAACCTAGCTTTCTGGCTGCAGCAGGACAAGTTGTTGGCAGCAAGCTGGTGCCATTCATGGGCTACCCAGGAGTTGCCATGTGGCAGTTTTTATCACCTGCTGCTGTTGATACCTCACAGGACCATGTTCTCAGGCCCCCAGTAGCATAA 639 0.4444 MSNSNWVLDYDYLDNIPLTTLEPPNFSWSSSSPPPTLSVELDDSFGILDGLKENRSRKRLRPSDSKACREKMRRDRLNDRFMELGSILDPRKPLKMDKAVILSDAVRVVSQLREEAQKLRESTENLQEKINALKDEKNELRDEKQRLKVEKENLEQKVKALSSQPSFLAAAGQVVGSKLVPFMGYPGVAMWQFLSPAAVDTSQDHVLRPPVA 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00597 212 SMART finulus 67 118 IPR011598 GO:0046983
Gma15g00597 212 CDD bHLH_AtILR3_like 66 141 - -
Gma15g00597 212 Coils Coil 102 164 - -
Gma15g00597 212 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 61 112 IPR011598 GO:0046983
Gma15g00597 212 Gene3D - 64 141 IPR036638 GO:0046983
Gma15g00597 212 Pfam Helix-loop-helix DNA-binding domain 65 112 IPR011598 GO:0046983
Gma15g00597 212 PANTHER BHLH TRANSCRIPTION FACTOR 3 212 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Gma15g00597 212 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 65 132 IPR036638 GO:0046983
Gma15g00597 212 PANTHER TRANSCRIPTION FACTOR ILR3-LIKE 3 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00597 Gma-Chr15 4908295 4911587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00597 3 212 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 54.936 4.14e-77 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma15g00597 HLH 6.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00597 - - gmx:100790993 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00597 15 4908295 4911587 Gma13g02237 13 37264783 37267242 GST