Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00594 ATGCGAAGGGATCGACTTAATGACAGGTTTATGGAACTGGGGTCTATCTTGGACCCTAGAAAGCCTCTCAAAATGGACAAGGCTGTTATATTAAGTGATGCAGTTCGAGTTGTTTCTCAGTTACGAGAGGAAGCTCAAAAGCTGAGGGAGTCCACTGAGAATCTACAAGAGAAAATCAATGCATTGAAGGTGTGTAAGCTTATGTAA 207 0.4203 MRRDRLNDRFMELGSILDPRKPLKMDKAVILSDAVRVVSQLREEAQKLRESTENLQEKINALKVCKLM 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00594 68 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 2 62 IPR036638 GO:0046983
Gma15g00594 68 Coils Coil 31 65 - -
Gma15g00594 68 Pfam Helix-loop-helix DNA-binding domain 2 41 IPR011598 GO:0046983
Gma15g00594 68 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 41 IPR011598 GO:0046983
Gma15g00594 68 Gene3D - 1 66 IPR036638 GO:0046983
Gma15g00594 68 PANTHER TRANSCRIPTION FACTOR ILR3-LIKE 1 66 - -
Gma15g00594 68 SMART finulus 1 47 IPR011598 GO:0046983
Gma15g00594 68 PANTHER BHLH TRANSCRIPTION FACTOR 1 66 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00594 Gma-Chr15 4897314 4897634 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00594 2 66 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 66.154 1.01e-23 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma15g00594 HLH 7.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00594 - - gmx:100790993 122.094