Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00583 ATGTTGATTTTTGTTACGACAGAGTATGCCTATACTTGTAGGGTGACAGAGAAGAATGATGTTTACAGCTTTGGGGCAGTGCTGATGGAGTTGGTAACGGGGAAGAGGCCTATGGAGCCAGAGTTTGGAGAGAATCATGACATTGTGCATTGGGTATGCAACAATATTAGGAGCAGAGAAGATGCTCTTGAATTGGTGGATCCTACCATTGCAAAGCATTTCAAAGAGGATGCCATGAAGGTGTTGAAAATCGCAACCCTATGTATGCACTGGGAAAATTCCAGCTTCAAGACCCTCAATGAGAATGTTGGAAGAGGCAGATCCATTTACCACAACCAAAATGATTGTGACCATTGA 357 0.4314 MLIFVTTEYAYTCRVTEKNDVYSFGAVLMELVTGKRPMEPEFGENHDIVHWVCNNIRSREDALELVDPTIAKHFKEDAMKVLKIATLCMHWENSSFKTLNENVGRGRSIYHNQNDCDH 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00583 118 Pfam Protein tyrosine and serine/threonine kinase 5 59 IPR001245 GO:0004672|GO:0006468
Gma15g00583 118 Gene3D Transferase(Phosphotransferase) domain 1 3 116 - -
Gma15g00583 118 PANTHER RECEPTOR-LIKE PROTEIN KINASE HAIKU2 4 89 - -
Gma15g00583 118 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 89 - -
Gma15g00583 118 SUPERFAMILY Protein kinase-like (PK-like) 8 90 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00583 Gma-Chr15 4828703 4829059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00583 8 88 Receptor kinase-like Gene Family AT1G09970 60.494 1.32e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gma15g00583 PK_Tyr_Ser-Thr 2.3e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00583 - - gmx:100811489 163.696