Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00573 ATGAAGGAGAACTACTCATACCAatcgtatccagattcaggcgagtcctctccacgctccagagagatcgacttcgagaacccTCCTCCATGGGACCACCAAAACTACAAAGCCAAGTTCATCTGCAGCTATGGCGGCAAGATCCACCCACGCTCCcacgacaaccagctctcctacgtcggcggcgacaccaaaatcctcgccgtcgaccgctccatcaagttccccgccatgcttgccaaactctccgccctctgcgacgcccaagacaacaacatcaccttcaagtaccagctccccggcgaagacctcgacgctctcatctccgtcaccaacgacgacgaccttgaccacatgatgcacgagtacgatcgcctctaccgcgcttccgctagaccctcccgcatgcgattattcctcttTCCTTCCGATACTCCTCCTTCGCCTCCACCTGCTTCTGCTCCACCTGATACCGTTATCAAACCTAATAACGTCGATTTTCTCTTCGCTCTCGAAAAAAACGTCGCCGTCCCTGCTCCTCCGCCTCCTCAGCCACCACCGGTTTCTGTCAAATTTAATGATCCGCTGCCGGAGCCTGTGGCGCCGCAGCCGGAGTACCGGTCGCGGTTGAATTTTAACCCTGCGGTTTCGGATCCAAGCGCGATTCAGCGCCAGTTGCATCAATTGCAAATTGCGGAGAACGAGAAAGCTTCGTATCGGAGGAAGAACGAGGATAATTACCCTGCCGGTGATTACTACGTTCAGAAAATGCCCGAGAAGTTCCCGCCAGCGAATTTTCCGGCAAGCGCACCGGGTTATTGGCCTGAAAAACATGTTTCCGGCGAGGCTTATCCGCCGGCGGTTACGGCAACGTCCGGCGGAGGGGAACCGTCGGTTTATATGATTCCGGCGCCGGGGACGTTCTATCATGCACCAGTTATGCGGCCTCCGGCCACTCAGGGATACTACGCAGTGCAACAAATGGGTTCTGATAATTACCGTGAAGCACCGGTTTATGGCGGTGTTCCGCCGCCTAAAGCGGCGATTCCGGCTAGCTTGGCGCCGGCGCAGCAGCCGGTTAAGGCTCCCGCGTATACGGAAGGATTCGGAATGGTTCGGCCAGGTGGGATGCTGGATAATACGGTTGGTCCGTACTCGCAGGTGGCGTACGATAGTGCGAGTGGGAGACAGGTTTATTATACTGTGCCGGGTGGTGGGGTAGTGCACGCTCCTCCGTACCAAGGGGTTTTTCCGCCCGTAACCGCAGATATGAGACCGGGTGTGGTGTCGTTGGGTCAGGATGTTAAAGTCATAAACAAGGTTACTCAAGGTTCAGTGTGA 1341 0.4169 MKENYSYQSYPDSGESSPRSREIDFENPPPWDHQNYKAKFICSYGGKIHPRSHDNQLSYVGGDTKILAVDRSIKFPAMLAKLSALCDAQDNNITFKYQLPGEDLDALISVTNDDDLDHMMHEYDRLYRASARPSRMRLFLFPSDTPPSPPPASAPPDTVIKPNNVDFLFALEKNVAVPAPPPPQPPPVSVKFNDPLPEPVAPQPEYRSRLNFNPAVSDPSAIQRQLHQLQIAENEKASYRRKNEDNYPAGDYYVQKMPEKFPPANFPASAPGYWPEKHVSGEAYPPAVTATSGGGEPSVYMIPAPGTFYHAPVMRPPATQGYYAVQQMGSDNYREAPVYGGVPPPKAAIPASLAPAQQPVKAPAYTEGFGMVRPGGMLDNTVGPYSQVAYDSASGRQVYYTVPGGGVVHAPPYQGVFPPVTADMRPGVVSLGQDVKVINKVTQGSV 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00573 446 CDD PB1_UP2 41 141 - -
Gma15g00573 446 MobiDBLite consensus disorder prediction 1 30 - -
Gma15g00573 446 Coils Coil 222 242 - -
Gma15g00573 446 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 1 440 - -
Gma15g00573 446 SMART PB1_new 52 143 IPR000270 GO:0005515
Gma15g00573 446 Pfam PB1 domain 53 142 IPR000270 GO:0005515
Gma15g00573 446 MobiDBLite consensus disorder prediction 1 16 - -
Gma15g00573 446 SUPERFAMILY CAD & PB1 domains 53 146 - -
Gma15g00573 446 PANTHER OS05G0427100 PROTEIN-RELATED 1 440 - -
Gma15g00573 446 Gene3D - 58 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00573 Gma-Chr15 4760746 4762426 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma15g00573 36 143 MAP Kinase Kinase Kinase AT5G57610 45.370 2.26e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00573 - - gmx:100780332 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00573 15 4760746 4762426 Gma13g02265 13 37468642 37470405 GST
Gma07g01792 07 39072132 39073553 Gma15g00573 15 4760746 4762426 PCT
Gma08g00617 08 5072715 5074300 Gma15g00573 15 4760746 4762426 PCT
Gma15g00573 15 4760746 4762426 Gma07g01792 07 39072132 39073553 PCT
Gma15g00573 15 4760746 4762426 Gma08g00617 08 5072715 5074300 PCT